Variant report

Variant	rs9443923
Chromosome Location	chr6:82190225-82190226
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10943817	0.98[EUR][1000 genomes]
rs12213217	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12213269	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2145428	0.82[AMR][1000 genomes]
rs2753422	0.86[EUR][1000 genomes]
rs4126327	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4285367	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4448140	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4706897	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6910041	0.86[CHB][hapmap]
rs9294233	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9350930	0.86[CHB][hapmap]
rs9353012	0.81[EUR][1000 genomes]
rs9353014	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9359497	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9443924	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9449340	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9449342	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv604087	chr6:81792413-82326091	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1032655	chr6:81942397-82225830	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82189800-82191000	Weak transcription	Placenta Amnion	Placenta Amnion

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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