Variant report
Variant | rs9443964 |
---|---|
Chromosome Location | chr6:82844981-82844982 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs12528973 | 0.99[ASN][1000 genomes] |
rs13196653 | 0.99[ASN][1000 genomes] |
rs13200811 | 0.91[ASN][1000 genomes] |
rs13201179 | 0.93[ASN][1000 genomes] |
rs13208556 | 0.96[ASN][1000 genomes] |
rs13211030 | 0.99[ASN][1000 genomes] |
rs13211186 | 0.99[ASN][1000 genomes] |
rs13213760 | 0.93[ASN][1000 genomes] |
rs13215666 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1933023 | 0.92[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs2027246 | 0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs34424495 | 0.99[ASN][1000 genomes] |
rs35958090 | 0.91[ASN][1000 genomes] |
rs4452688 | 0.99[ASN][1000 genomes] |
rs4706933 | 0.96[ASN][1000 genomes] |
rs56989837 | 0.96[ASN][1000 genomes] |
rs7741402 | 0.90[ASN][1000 genomes] |
rs7750228 | 0.96[ASN][1000 genomes] |
rs9443956 | 0.90[ASN][1000 genomes] |
rs9443960 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9443963 | 0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs9449423 | 0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs9449425 | 0.81[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1021464 | chr6:82738920-82876526 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer | Chromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
2 | nsv830713 | chr6:82761201-82953570 | Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 5 gene(s) | inside rSNPs | diseases |
3 | nsv830715 | chr6:82806657-82956327 | Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 10 gene(s) | inside rSNPs | diseases |
4 | nsv7937 | chr6:82840235-83244788 | Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 25 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:82827800-82847600 | Weak transcription | Left Ventricle | heart |
2 | chr6:82839600-82850600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |