Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs12528973	0.80[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs13196653	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs13201179	0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs13208556	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13211030	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs13211186	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs13213760	0.87[ASN][1000 genomes]
rs13215666	0.91[ASN][1000 genomes]
rs1891346	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1933023	0.81[ASN][1000 genomes]
rs2027246	0.99[ASN][1000 genomes]
rs2105124	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs34424495	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35958090	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4452688	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4706933	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs56989837	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7741402	0.96[ASN][1000 genomes]
rs7750228	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs9443956	0.96[ASN][1000 genomes]
rs9443960	0.94[ASN][1000 genomes]
rs9443963	0.91[ASN][1000 genomes]
rs9443964	0.91[ASN][1000 genomes]
rs9449423	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021464	chr6:82738920-82876526	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv830713	chr6:82761201-82953570	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv830715	chr6:82806657-82956327	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82822600-82827400	Weak transcription	Left Ventricle	heart
2	chr6:82823200-82825000	Weak transcription	Fetal Heart	heart
3	chr6:82823800-82824200	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr6:82823800-82825400	Enhancers	HepG2	liver

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