Variant report
| Variant | rs9449314 |
|---|---|
| Chromosome Location | chr6:82106121-82106122 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:33)
| rs_ID | r2[population] |
|---|---|
| rs11753135 | 0.87[ASN][1000 genomes] |
| rs11758279 | 0.87[ASN][1000 genomes] |
| rs1373361 | 0.87[ASN][1000 genomes] |
| rs2120537 | 0.87[ASN][1000 genomes] |
| rs2166042 | 0.87[ASN][1000 genomes] |
| rs6910975 | 0.91[ASN][1000 genomes] |
| rs6926940 | 0.91[ASN][1000 genomes] |
| rs6927320 | 0.85[ASN][1000 genomes] |
| rs6931814 | 0.87[ASN][1000 genomes] |
| rs9283800 | 0.84[ASN][1000 genomes] |
| rs9294220 | 0.84[ASN][1000 genomes] |
| rs9294221 | 0.83[ASN][1000 genomes] |
| rs9294222 | 0.87[ASN][1000 genomes] |
| rs9294224 | 0.87[ASN][1000 genomes] |
| rs9294225 | 0.87[ASN][1000 genomes] |
| rs9294226 | 0.87[ASN][1000 genomes] |
| rs9341882 | 0.87[ASN][1000 genomes] |
| rs9344166 | 0.83[ASN][1000 genomes] |
| rs9344167 | 0.87[ASN][1000 genomes] |
| rs9350926 | 0.87[ASN][1000 genomes] |
| rs9359485 | 0.87[ASN][1000 genomes] |
| rs9359486 | 0.87[ASN][1000 genomes] |
| rs9359487 | 0.87[ASN][1000 genomes] |
| rs9359488 | 0.87[ASN][1000 genomes] |
| rs9361801 | 0.83[ASN][1000 genomes] |
| rs9361802 | 0.83[ASN][1000 genomes] |
| rs9361803 | 0.83[ASN][1000 genomes] |
| rs9361806 | 0.87[ASN][1000 genomes] |
| rs9361807 | 0.87[ASN][1000 genomes] |
| rs9361812 | 0.91[ASN][1000 genomes] |
| rs9443905 | 0.91[ASN][1000 genomes] |
| rs9449310 | 0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs9885937 | 0.87[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv604087 | chr6:81792413-82326091 | Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
| 2 | nsv1032655 | chr6:81942397-82225830 | Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats | Chromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
| 3 | nsv886328 | chr6:82036764-82120647 | Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats | Chromatin interactive region | n/a | inside rSNPs | diseases |
| 4 | esv34899 | chr6:82090758-82161121 | Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS | n/a | n/a | inside rSNPs | diseases |
| 5 | esv2757183 | chr6:82098060-82161121 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS | n/a | n/a | inside rSNPs | diseases |
| 6 | esv2759450 | chr6:82098060-82161121 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS | n/a | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:82102600-82111400 | Weak transcription | Aorta | Aorta |
