Variant report

Variant	rs9455340
Chromosome Location	chr6:71835869-71835870
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1207167	1.00[ASW][hapmap];1.00[MKK][hapmap];0.80[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1739803	1.00[AMR][1000 genomes]
rs1739804	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1819738	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1891524	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1935804	1.00[AMR][1000 genomes]
rs1935805	1.00[AMR][1000 genomes]
rs2881839	1.00[AMR][1000 genomes]
rs58530565	1.00[AMR][1000 genomes]
rs73500913	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73501153	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73501157	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7743246	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9455331	1.00[AMR][1000 genomes]
rs9455333	1.00[AMR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71834400-71836200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr6:71834600-71848800	Weak transcription	NH-A	brain
3	chr6:71835000-71836000	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr6:71835000-71836000	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr6:71835000-71836000	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr6:71835200-71836200	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr6:71835400-71836000	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr6:71835600-71836000	Enhancers	H1 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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