Variant report

Variant rs9469630
Chromosome Location chr6:11610009-11610010
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:11605400-11610400 Enhancers Cortex derived primary cultured neurospheres brain
2 chr6:11606000-11612600 Weak transcription Placenta Amnion Placenta Amnion
3 chr6:11606400-11611200 Enhancers NHDF-Ad bronchial
4 chr6:11606600-11611200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr6:11607600-11615200 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr6:11608000-11610800 Weak transcription Small Intestine intestine
7 chr6:11608200-11611000 Weak transcription Adipose Nuclei Adipose
8 chr6:11608200-11613600 Weak transcription Rectal Smooth Muscle rectum
9 chr6:11608200-11615600 Weak transcription Colon Smooth Muscle Colon
10 chr6:11608400-11610400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:11608800-11610200 Enhancers Brain Germinal Matrix brain
12 chr6:11608800-11610600 Enhancers Osteobl bone
13 chr6:11608800-11611000 Enhancers Skeletal Muscle Male skeletal muscle
14 chr6:11608800-11611200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr6:11608800-11611200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
16 chr6:11608800-11611200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
17 chr6:11608800-11611200 Enhancers NHLF lung
18 chr6:11608800-11614200 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr6:11609000-11610200 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr6:11609000-11610200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr6:11609000-11610200 Flanking Active TSS A549 lung
22 chr6:11609000-11610600 Enhancers Placenta Placenta
23 chr6:11609000-11611200 Enhancers Aorta Aorta
24 chr6:11609000-11611200 Enhancers Lung lung
25 chr6:11609000-11612200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr6:11609200-11610200 Enhancers HUES6 Cell Line embryonic stem cell
27 chr6:11609200-11610200 Enhancers iPS-20b Cell Line embryonic stem cell
28 chr6:11609200-11610400 Enhancers HUES64 Cell Line embryonic stem cell
29 chr6:11609200-11610400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr6:11609200-11610600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:11609400-11610200 Enhancers H1 Cell Line embryonic stem cell
32 chr6:11609400-11610200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr6:11609400-11610200 Enhancers HUES48 Cell Line embryonic stem cell
34 chr6:11609400-11610200 Enhancers Left Ventricle heart
35 chr6:11609400-11610200 Enhancers Stomach Smooth Muscle stomach
36 chr6:11609400-11610200 Flanking Active TSS Hela-S3 cervix
37 chr6:11609400-11610200 Flanking Active TSS NH-A brain
38 chr6:11609400-11610400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr6:11609400-11610400 Enhancers Fetal Muscle Trunk muscle
40 chr6:11609400-11610400 Enhancers Fetal Stomach stomach
41 chr6:11609400-11610600 Enhancers Ovary ovary
42 chr6:11609400-11610800 Enhancers Fetal Adrenal Gland Adrenal Gland
43 chr6:11609400-11611000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
44 chr6:11609400-11611200 Enhancers Fetal Muscle Leg muscle
45 chr6:11609600-11611000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr6:11609600-11611200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr6:11609600-11611400 Enhancers HSMM muscle
48 chr6:11609600-11611400 Enhancers HSMMtube muscle
49 chr6:11609600-11611600 Enhancers Muscle Satellite Cultured Cells --
50 chr6:11609800-11610200 Enhancers H9 Cell Line embryonic stem cell

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