Variant report

Variant rs9476020
Chromosome Location chr6:57338318-57338319
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:57333000-57339600 Enhancers iPS-15b Cell Line embryonic stem cell
2 chr6:57333400-57340800 Enhancers HUES48 Cell Line embryonic stem cell
3 chr6:57333600-57339600 Enhancers HUES64 Cell Line embryonic stem cell
4 chr6:57333600-57341400 Enhancers Osteobl bone
5 chr6:57333800-57338800 Enhancers Cortex derived primary cultured neurospheres brain
6 chr6:57334000-57340400 Weak transcription Aorta Aorta
7 chr6:57335600-57338600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr6:57335600-57341200 Enhancers NHLF lung
9 chr6:57335800-57338400 Enhancers H1 Cell Line embryonic stem cell
10 chr6:57336400-57339400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr6:57336400-57341400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr6:57337200-57338400 Enhancers HSMMtube muscle
13 chr6:57337200-57338600 Enhancers NH-A brain
14 chr6:57337400-57338600 Enhancers HUVEC blood vessel
15 chr6:57337600-57338400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
16 chr6:57337600-57338400 Enhancers Adipose Nuclei Adipose
17 chr6:57337600-57338400 Enhancers Brain Substantia Nigra brain
18 chr6:57337600-57338400 Enhancers Rectal Smooth Muscle rectum
19 chr6:57337600-57338600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr6:57337600-57338600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr6:57337600-57338600 Flanking Active TSS Muscle Satellite Cultured Cells --
22 chr6:57337600-57338600 Enhancers Brain Germinal Matrix brain
23 chr6:57337600-57338600 Enhancers HSMM muscle
24 chr6:57337600-57338800 Enhancers ES-I3 Cell Line embryonic stem cell
25 chr6:57337600-57338800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr6:57337600-57339000 Enhancers iPS-18 Cell Line embryonic stem cell
27 chr6:57337600-57339600 Enhancers HUES6 Cell Line embryonic stem cell
28 chr6:57337600-57339600 Enhancers Fetal Kidney kidney
29 chr6:57337600-57340000 Enhancers Fetal Lung lung
30 chr6:57337600-57340200 Enhancers iPS-20b Cell Line embryonic stem cell
31 chr6:57337800-57338400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:57337800-57338600 Enhancers Brain Hippocampus Middle brain
33 chr6:57337800-57338600 Enhancers Colon Smooth Muscle Colon
34 chr6:57338000-57338400 Enhancers ES-WA7 Cell Line embryonic stem cell
35 chr6:57338000-57338400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
36 chr6:57338000-57338400 Enhancers Fetal Stomach stomach
37 chr6:57338000-57341000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr6:57338200-57338600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr6:57338200-57338600 Flanking Active TSS NHDF-Ad bronchial
40 chr6:57338200-57338800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr6:57338200-57339400 Weak transcription H9 Cell Line embryonic stem cell
42 chr6:57338200-57339400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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