Variant report

Variant	rs9483381
Chromosome Location	chr6:132410065-132410066
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs13437273	1.00[YRI][hapmap]
rs7357019	1.00[YRI][hapmap]
rs9493176	1.00[AFR][1000 genomes]
rs9493234	1.00[YRI][hapmap]
rs9493246	1.00[YRI][hapmap]
rs9493249	1.00[YRI][hapmap]
rs9493252	1.00[YRI][hapmap]
rs9493254	1.00[YRI][hapmap]
rs9493260	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762616	chr6:132404708-132584324	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132404000-132410400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr6:132406800-132410400	Enhancers	Muscle Satellite Cultured Cells	--
3	chr6:132407200-132411600	Weak transcription	Pancreas	Pancrea
4	chr6:132407200-132420400	Weak transcription	Aorta	Aorta
5	chr6:132408200-132417600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr6:132408600-132410200	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr6:132408600-132411000	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr6:132408800-132410400	Enhancers	H1 Cell Line	embryonic stem cell
9	chr6:132409000-132410200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:132409200-132411200	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr6:132409600-132410400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr6:132409600-132410400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr6:132409600-132411000	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr6:132410000-132410400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr6:132410000-132410400	Enhancers	H9 Cell Line	embryonic stem cell
16	chr6:132410000-132411600	Enhancers	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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