Variant report

Variant	rs9486480
Chromosome Location	chr6:107307831-107307832
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11751550	0.82[EUR][1000 genomes]
rs11752168	0.82[EUR][1000 genomes]
rs11753287	0.82[EUR][1000 genomes]
rs11757253	0.88[EUR][1000 genomes]
rs11757264	0.88[EUR][1000 genomes]
rs11962241	0.82[EUR][1000 genomes]
rs272584	0.96[EUR][1000 genomes]
rs7750798	0.96[EUR][1000 genomes]
rs7770877	0.82[EUR][1000 genomes]
rs910529	0.81[EUR][1000 genomes]
rs9372144	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9386596	1.00[ASN][1000 genomes]
rs9400072	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400073	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9480711	0.86[EUR][1000 genomes]
rs9486479	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9486481	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:107305400-107308000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr6:107305600-107308200	Enhancers	HMEC	breast
3	chr6:107305600-107308200	Enhancers	NHEK	skin
4	chr6:107307200-107308000	Enhancers	Esophagus	oesophagus
5	chr6:107307200-107309600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr6:107307600-107309600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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