Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:107246166..107247862-chr6:107251741..107254084,2	MCF-7	breast:
2	chr6:107244415..107247140-chr6:107252509..107254102,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11751550	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11752168	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11753287	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11757253	0.94[EUR][1000 genomes]
rs11757264	0.94[EUR][1000 genomes]
rs11962241	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12661346	0.88[ASN][1000 genomes]
rs12662469	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs13199885	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs1358724	0.81[AFR][1000 genomes]
rs272584	0.86[EUR][1000 genomes]
rs6937522	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs71574211	0.88[ASN][1000 genomes]
rs7750798	0.82[EUR][1000 genomes]
rs910529	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs910530	1.00[ASN][1000 genomes]
rs910531	1.00[ASN][1000 genomes]
rs9372144	0.82[EUR][1000 genomes]
rs9400072	0.82[EUR][1000 genomes]
rs9400073	0.82[EUR][1000 genomes]
rs9480707	0.88[ASN][1000 genomes]
rs9480708	0.88[ASN][1000 genomes]
rs9480709	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs9480711	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9486465	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs9486466	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs9486479	0.82[EUR][1000 genomes]
rs9486480	0.82[EUR][1000 genomes]
rs9486481	0.82[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:107249000-107254600	Weak transcription	NHEK	skin
2	chr6:107249000-107255400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:107250200-107253800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr6:107251800-107254000	Enhancers	Placenta	Placenta
5	chr6:107252600-107253400	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr6:107252600-107253400	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr6:107252600-107253600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr6:107252800-107253400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr6:107252800-107254800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr6:107253000-107255600	Weak transcription	HepG2	liver

Quick Search: