Variant report
| Variant | rs12661346 |
|---|---|
| Chromosome Location | chr6:107249083-107249084 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:107245200-107249200 | Enhancers | HMEC | breast |
| 2 | chr6:107245200-107249600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 3 | chr6:107245600-107251800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 4 | chr6:107246000-107250600 | Enhancers | Fetal Intestine Small | intestine |
| 5 | chr6:107246000-107251400 | Enhancers | Pancreas | Pancrea |
| 6 | chr6:107246000-107252000 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 7 | chr6:107246200-107250400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 8 | chr6:107246800-107249200 | Enhancers | Esophagus | oesophagus |
| 9 | chr6:107246800-107250200 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 10 | chr6:107246800-107252000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 11 | chr6:107247000-107251000 | Weak transcription | Gastric | stomach |
| 12 | chr6:107247200-107251200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 13 | chr6:107247200-107253000 | Enhancers | H9 Cell Line | embryonic stem cell |
| 14 | chr6:107247400-107252200 | Weak transcription | K562 | blood |
| 15 | chr6:107247600-107251000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 16 | chr6:107247600-107251800 | Weak transcription | Placenta | Placenta |
| 17 | chr6:107247800-107249400 | Enhancers | HepG2 | liver |
| 18 | chr6:107248000-107249600 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 19 | chr6:107248000-107250200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 20 | chr6:107248000-107251000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 21 | chr6:107248200-107250400 | Enhancers | H1 Cell Line | embryonic stem cell |
| 22 | chr6:107248200-107252000 | Weak transcription | Stomach Mucosa | stomach |
| 23 | chr6:107248400-107249600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 24 | chr6:107248400-107249600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 25 | chr6:107248400-107251800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 26 | chr6:107248600-107249800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 27 | chr6:107248600-107250000 | Weak transcription | Fetal Intestine Large | intestine |
| 28 | chr6:107248800-107249600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 29 | chr6:107248800-107250200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 30 | chr6:107249000-107249200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 31 | chr6:107249000-107249400 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
| 32 | chr6:107249000-107249600 | Bivalent Enhancer | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 33 | chr6:107249000-107249800 | Enhancers | Fetal Kidney | kidney |
| 34 | chr6:107249000-107250400 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 35 | chr6:107249000-107251000 | Weak transcription | Psoas Muscle | Psoas |
| 36 | chr6:107249000-107254600 | Weak transcription | NHEK | skin |
| 37 | chr6:107249000-107255400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
