Variant report

Variant	rs9480708
Chromosome Location	chr6:107242656-107242657
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11751550	0.88[ASN][1000 genomes]
rs11752168	0.88[ASN][1000 genomes]
rs11962241	0.88[ASN][1000 genomes]
rs12661346	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12662469	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13199885	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6937522	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71574211	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7770877	0.88[ASN][1000 genomes]
rs910529	0.88[ASN][1000 genomes]
rs910530	0.88[ASN][1000 genomes]
rs910531	0.88[ASN][1000 genomes]
rs9480707	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9480709	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9486464	0.97[AFR][1000 genomes]
rs9486465	1.00[CEU][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9486466	1.00[CEU][hapmap];0.94[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:107232400-107245000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:107237200-107245000	Weak transcription	Liver	Liver
3	chr6:107238800-107242800	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr6:107238800-107242800	Enhancers	Skeletal Muscle Female	skeletal muscle
5	chr6:107241000-107245200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr6:107241000-107245400	Weak transcription	Esophagus	oesophagus
7	chr6:107241600-107242800	Enhancers	Fetal Intestine Small	intestine
8	chr6:107241800-107243000	Enhancers	Fetal Intestine Large	intestine
9	chr6:107242000-107246000	Weak transcription	Pancreas	Pancrea
10	chr6:107242200-107243600	Enhancers	Adipose Nuclei	Adipose
11	chr6:107242400-107245000	Weak transcription	HepG2	liver
12	chr6:107242600-107247000	Weak transcription	Psoas Muscle	Psoas

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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