Variant report
Variant | rs9502375 |
---|---|
Chromosome Location | chr6:5908215-5908216 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:5907031..5909044-chr6:5909649..5911954,2 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1001289 | 0.90[ASN][1000 genomes] |
rs1001290 | 0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10155695 | 0.88[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs10155777 | 0.86[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs11243038 | 0.82[ASN][1000 genomes] |
rs11243040 | 0.82[ASN][1000 genomes] |
rs12191308 | 0.82[ASN][1000 genomes] |
rs12191669 | 0.88[ASN][1000 genomes] |
rs12193326 | 0.82[ASN][1000 genomes] |
rs12199406 | 0.82[ASN][1000 genomes] |
rs12211137 | 0.82[ASN][1000 genomes] |
rs12213320 | 0.81[CHD][hapmap];0.85[JPT][hapmap] |
rs1590328 | 0.82[ASN][1000 genomes] |
rs6597169 | 0.85[ASN][1000 genomes] |
rs6597170 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6597171 | 0.90[ASN][1000 genomes] |
rs66487772 | 0.82[ASN][1000 genomes] |
rs66912941 | 0.81[ASN][1000 genomes] |
rs67655188 | 0.82[ASN][1000 genomes] |
rs68186549 | 0.82[ASN][1000 genomes] |
rs7744130 | 0.82[ASN][1000 genomes] |
rs7744234 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs7745594 | 0.82[ASN][1000 genomes] |
rs7755613 | 0.88[ASN][1000 genomes] |
rs7764824 | 0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs7766117 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs7769375 | 0.82[ASN][1000 genomes] |
rs7770163 | 0.90[ASN][1000 genomes] |
rs9504571 | 0.82[ASN][1000 genomes] |
rs9504576 | 0.82[ASN][1000 genomes] |
rs9504579 | 0.86[AMR][1000 genomes];0.90[ASN][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:5907600-5908600 | Weak transcription | HSMMtube | muscle |