The 2.0 version of rSNPBase

Variant report

Variant rs9508686
Chromosome Location chr13:30847652-30847653
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30805600-30853200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr13:30810600-30849200 Weak transcription Fetal Muscle Trunk muscle
3 chr13:30813000-30849000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr13:30823600-30849200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr13:30823600-30849200 Weak transcription HSMM muscle
6 chr13:30823800-30849200 Weak transcription Fetal Brain Female brain
7 chr13:30824000-30848800 Weak transcription Fetal Muscle Leg muscle
8 chr13:30824200-30849200 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr13:30824400-30849200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr13:30826800-30860400 Weak transcription Esophagus oesophagus
11 chr13:30828200-30849000 Weak transcription Muscle Satellite Cultured Cells --
12 chr13:30828400-30848800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr13:30828600-30857600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr13:30829600-30848800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr13:30829800-30850000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr13:30832000-30849000 Weak transcription Fetal Lung lung
17 chr13:30832200-30848000 Weak transcription NHLF lung
18 chr13:30832200-30849200 Weak transcription Aorta Aorta
19 chr13:30832200-30849400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr13:30832200-30855400 Weak transcription Fetal Brain Male brain
21 chr13:30832200-30861000 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr13:30832200-30863400 Weak transcription Stomach Smooth Muscle stomach
23 chr13:30832200-30863800 Weak transcription HSMMtube muscle
24 chr13:30832400-30849000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr13:30832400-30859400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr13:30834600-30853000 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr13:30837200-30853000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr13:30837800-30860000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr13:30840400-30859800 Weak transcription H1 Cell Line embryonic stem cell
30 chr13:30841600-30849000 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr13:30841600-30853200 Weak transcription Adipose Nuclei Adipose
32 chr13:30842000-30853200 Weak transcription Fetal Kidney kidney
33 chr13:30842400-30848000 Weak transcription Liver Liver
34 chr13:30842400-30848000 Weak transcription NHDF-Ad bronchial
35 chr13:30842400-30849200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr13:30842400-30850200 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr13:30842400-30853600 Weak transcription Colon Smooth Muscle Colon
38 chr13:30842400-30858200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr13:30842400-30863800 Weak transcription Ovary ovary
40 chr13:30842800-30853400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr13:30843000-30848600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr13:30843000-30849000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr13:30843000-30849400 Weak transcription GM12878-XiMat blood
44 chr13:30843000-30851200 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr13:30843000-30853400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr13:30843000-30857600 Weak transcription A549 lung
47 chr13:30843000-30880200 Weak transcription Fetal Stomach stomach
48 chr13:30843200-30849200 Weak transcription Fetal Thymus thymus
49 chr13:30843600-30855800 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr13:30844000-30854800 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015