The 2.0 version of rSNPBase

Variant report

Variant rs9534900
Chromosome Location chr13:48564970-48564971
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48514400-48574000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr13:48532200-48565200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr13:48532400-48565200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr13:48534200-48573200 Weak transcription Brain Angular Gyrus brain
5 chr13:48534400-48574400 Weak transcription Small Intestine intestine
6 chr13:48537200-48574200 Weak transcription Colonic Mucosa Colon
7 chr13:48537400-48574000 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr13:48537400-48574400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr13:48538000-48567200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr13:48538400-48574000 Weak transcription Hela-S3 cervix
11 chr13:48539600-48571200 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr13:48540000-48574200 Weak transcription H9 Cell Line embryonic stem cell
13 chr13:48540800-48565000 Weak transcription NH-A brain
14 chr13:48542400-48565200 Weak transcription Psoas Muscle Psoas
15 chr13:48542400-48567000 Weak transcription Esophagus oesophagus
16 chr13:48543000-48574400 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr13:48546400-48565200 Weak transcription Pancreas Pancrea
18 chr13:48546600-48574400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr13:48546600-48574800 Weak transcription Spleen Spleen
20 chr13:48546800-48567000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr13:48546800-48567200 Weak transcription Brain Cingulate Gyrus brain
22 chr13:48546800-48571600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr13:48548000-48574200 Weak transcription Brain Inferior Temporal Lobe brain
24 chr13:48548800-48574400 Weak transcription Placenta Amnion Placenta Amnion
25 chr13:48549000-48565200 Weak transcription Muscle Satellite Cultured Cells --
26 chr13:48550200-48565200 Weak transcription Aorta Aorta
27 chr13:48550800-48574200 Weak transcription Ovary ovary
28 chr13:48551000-48573800 Weak transcription Fetal Heart heart
29 chr13:48551000-48574400 Weak transcription HSMMtube muscle
30 chr13:48552000-48574000 Weak transcription A549 lung
31 chr13:48556800-48565200 Weak transcription K562 blood
32 chr13:48557400-48567800 Strong transcription iPS-20b Cell Line embryonic stem cell
33 chr13:48557800-48571800 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr13:48557800-48572400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr13:48558000-48570800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr13:48558000-48573200 Strong transcription HUES64 Cell Line embryonic stem cell
37 chr13:48558600-48571800 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr13:48558800-48569000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr13:48559000-48567800 Strong transcription HSMM muscle
40 chr13:48559000-48571000 Strong transcription Primary monocytes fromperipheralblood blood
41 chr13:48559200-48568000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr13:48559200-48569400 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr13:48559200-48570000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr13:48559600-48571200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr13:48559800-48565200 Weak transcription Gastric stomach
46 chr13:48559800-48571600 Weak transcription Brain Substantia Nigra brain
47 chr13:48559800-48574200 Weak transcription Brain Anterior Caudate brain
48 chr13:48560000-48565200 Weak transcription H1 Cell Line embryonic stem cell
49 chr13:48560000-48565200 Weak transcription Stomach Smooth Muscle stomach
50 chr13:48560000-48574000 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015