Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11840558	0.82[EUR][1000 genomes]
rs1514544	0.82[ASN][1000 genomes]
rs17059287	0.83[EUR][1000 genomes]
rs4886294	1.00[CHB][hapmap]
rs7318756	0.89[EUR][1000 genomes]
rs73558000	0.84[EUR][1000 genomes]
rs73559806	0.83[EUR][1000 genomes]
rs73559830	0.83[EUR][1000 genomes]
rs73559837	0.83[EUR][1000 genomes]
rs7988647	0.83[EUR][1000 genomes]
rs7990636	0.87[ASN][1000 genomes]
rs7996351	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9528283	0.82[EUR][1000 genomes]
rs9528285	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9539009	0.89[EUR][1000 genomes]
rs9539010	0.89[EUR][1000 genomes]
rs9539012	0.83[EUR][1000 genomes]
rs9539013	0.83[EUR][1000 genomes]
rs9539016	0.83[EUR][1000 genomes]
rs9570419	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832626	chr13:61545191-61698233	Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv900242	chr13:61551100-61600601	Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:61584800-61602400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr13:61595400-61596400	Enhancers	Fetal Heart	heart

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