Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11841508	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12323122	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12866698	0.81[EUR][1000 genomes]
rs12875571	0.81[EUR][1000 genomes]
rs1333805	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13378379	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1365695	0.82[EUR][1000 genomes]
rs1556568	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1855395	0.81[ASN][1000 genomes]
rs6491851	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7327932	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7337235	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7986169	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7990249	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7991737	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9514209	0.81[ASN][1000 genomes]
rs9519209	0.81[ASN][1000 genomes]
rs9555037	0.81[ASN][1000 genomes]
rs9558262	0.81[ASN][1000 genomes]
rs9558263	0.81[ASN][1000 genomes]
rs9582837	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9586478	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9586746	0.80[EUR][1000 genomes]
rs995475	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv900790	chr13:88585928-88891870	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv900791	chr13:88623302-88771495	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv900792	chr13:88623302-88871759	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv900793	chr13:88711960-88871759	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:88711400-88713000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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