Variant report

Variant	rs9587769
Chromosome Location	chr13:89191518-89191519
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs12584112	0.85[ASN][1000 genomes]
rs17710699	0.95[CHB][hapmap];0.94[JPT][hapmap]
rs17710747	0.96[ASN][1000 genomes]
rs2347144	0.91[ASN][1000 genomes]
rs4123698	0.82[ASN][1000 genomes]
rs41275072	0.96[ASN][1000 genomes]
rs4397963	0.95[CHB][hapmap];0.94[JPT][hapmap]
rs56772332	0.96[ASN][1000 genomes]
rs58284225	0.85[ASN][1000 genomes]
rs61960848	0.82[ASN][1000 genomes]
rs61960850	0.85[ASN][1000 genomes]
rs61960851	0.85[ASN][1000 genomes]
rs61960852	0.92[ASN][1000 genomes]
rs7318431	0.92[ASN][1000 genomes]
rs9514903	0.87[ASN][1000 genomes]
rs9520955	0.83[ASN][1000 genomes]
rs9521035	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv900815	chr13:89098616-89216190	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv870345	chr13:89164439-89295782	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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