Variant report
| Variant | rs959320 |
|---|---|
| Chromosome Location | chr2:124822798-124822799 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:11)
| rs_ID | r2[population] |
|---|---|
| rs1213938 | 0.81[CEU][hapmap] |
| rs1213942 | 0.81[CEU][hapmap] |
| rs1213945 | 0.81[CEU][hapmap] |
| rs1213946 | 0.81[CEU][hapmap] |
| rs1213948 | 0.81[CEU][hapmap] |
| rs1213950 | 0.81[CEU][hapmap] |
| rs1213958 | 0.81[CEU][hapmap] |
| rs1213962 | 0.83[CEU][hapmap] |
| rs1228168 | 0.81[CEU][hapmap] |
| rs1816698 | 0.81[CEU][hapmap] |
| rs1898788 | 0.81[CEU][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv531408 | chr2:124727329-125011247 | Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
