Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1213938	0.96[CEU][hapmap];0.84[CHB][hapmap]
rs1213942	0.96[CEU][hapmap];0.84[CHB][hapmap]
rs1213945	0.95[CEU][hapmap];0.84[CHB][hapmap]
rs1213946	0.95[CEU][hapmap];0.84[CHB][hapmap]
rs1213948	0.96[CEU][hapmap]
rs1213950	0.95[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1213956	1.00[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1213958	0.96[CEU][hapmap];0.84[CHB][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1228168	0.96[CEU][hapmap];0.92[CHB][hapmap];0.86[JPT][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12711664	0.87[CEU][hapmap]
rs17010766	0.91[CHB][hapmap];0.86[JPT][hapmap];0.95[ASN][1000 genomes]
rs17010827	0.91[CHB][hapmap];0.86[JPT][hapmap];0.87[ASN][1000 genomes]
rs17010876	0.82[CHB][hapmap]
rs17278676	0.82[CHB][hapmap]
rs1816698	0.95[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap]
rs1898788	0.96[CEU][hapmap];0.92[CHB][hapmap];0.86[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2439003	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7567584	0.83[CHB][hapmap];0.86[JPT][hapmap];0.99[ASN][1000 genomes]
rs868995	0.82[CHB][hapmap]
rs959320	0.83[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531408	chr2:124727329-125011247	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:124792600-124797000	Weak transcription	Pancreatic Islets	Pancreatic Islet

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