Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:124804089..124806526-chr2:124808703..124810618,2	K562	blood:
2	chr2:124799189..124801120-chr2:124803368..124805161,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1213938	0.93[CHB][hapmap];0.91[JPT][hapmap]
rs1213942	0.93[CHB][hapmap];0.91[JPT][hapmap]
rs1213945	0.93[CHB][hapmap];0.81[CHD][hapmap];0.91[JPT][hapmap]
rs1213946	0.93[CHB][hapmap];0.81[CHD][hapmap];0.91[JPT][hapmap]
rs1213948	0.93[CHB][hapmap];0.91[JPT][hapmap]
rs1213950	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1213956	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs1213958	0.93[CHB][hapmap];0.91[JPT][hapmap];0.89[ASN][1000 genomes]
rs1213962	0.91[CHB][hapmap];0.86[JPT][hapmap];0.95[ASN][1000 genomes]
rs1228168	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs1347876	0.81[CHD][hapmap]
rs17010827	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.81[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17010848	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17010876	0.86[CHB][hapmap]
rs17039887	0.92[LWK][hapmap];1.00[MKK][hapmap]
rs17278676	0.86[CHB][hapmap]
rs1816698	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap]
rs1898788	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs2439003	0.93[ASN][1000 genomes]
rs7567584	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs868995	0.86[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531408	chr2:124727329-125011247	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:124803000-124805600	Enhancers	H1 Cell Line	embryonic stem cell
2	chr2:124803400-124805200	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr2:124803400-124806000	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr2:124803400-124807400	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr2:124804200-124805000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr2:124804200-124805600	Enhancers	H9 Cell Line	embryonic stem cell
7	chr2:124804400-124805400	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr2:124804400-124805600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr2:124804400-124805800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
10	chr2:124804400-124806600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr2:124804600-124807000	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr2:124804600-124807600	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chr2:124804800-124805000	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
14	chr2:124804800-124805000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr2:124804800-124805600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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