Variant report

Variant	rs9621594
Chromosome Location	chr22:33312387-33312388
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs12166948	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12167376	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12169902	0.82[EUR][1000 genomes]
rs12170951	0.85[ASN][1000 genomes]
rs13433590	0.85[ASN][1000 genomes]
rs137525	0.85[ASN][1000 genomes]
rs137530	0.85[ASN][1000 genomes]
rs58381381	0.83[ASN][1000 genomes]
rs58811278	0.85[ASN][1000 genomes]
rs61027525	0.85[ASN][1000 genomes]
rs62234176	0.85[ASN][1000 genomes]
rs62234177	0.85[ASN][1000 genomes]
rs62234178	0.85[ASN][1000 genomes]
rs62234180	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs80693	0.85[ASN][1000 genomes]
rs9619317	0.85[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33308000-33313000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr22:33308200-33313600	Weak transcription	Fetal Brain Male	brain
3	chr22:33310000-33313200	Weak transcription	Brain Cingulate Gyrus	brain
4	chr22:33311800-33312400	ZNF genes & repeats	Brain Anterior Caudate	brain
5	chr22:33311800-33313200	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
6	chr22:33311800-33313400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
7	chr22:33312000-33312400	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
8	chr22:33312000-33312400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
9	chr22:33312200-33313600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr22:33312200-33313800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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