The 2.0 version of rSNPBase

Variant report

Variant rs9688905
Chromosome Location chr6:25300422-25300423
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:25280800-25302800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:25286800-25300800 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr6:25288600-25301200 Weak transcription Brain Anterior Caudate brain
4 chr6:25289000-25300600 Weak transcription Pancreas Pancrea
5 chr6:25290400-25313400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr6:25292200-25303000 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr6:25292400-25301000 Weak transcription Adipose Nuclei Adipose
8 chr6:25293000-25301200 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr6:25293200-25301200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr6:25294200-25311200 Weak transcription Lung lung
11 chr6:25294600-25301600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr6:25296000-25301200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr6:25296400-25302400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr6:25296600-25301200 Weak transcription Brain Substantia Nigra brain
15 chr6:25296600-25302400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr6:25296600-25302600 Weak transcription Colonic Mucosa Colon
17 chr6:25296800-25301800 Weak transcription Fetal Intestine Large intestine
18 chr6:25296800-25302200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr6:25297000-25300600 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr6:25297000-25300600 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr6:25297200-25302600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr6:25297200-25303200 Weak transcription Primary T cells from cord blood blood
23 chr6:25297400-25300800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr6:25297400-25301600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr6:25297400-25301800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr6:25297400-25302400 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr6:25297400-25303000 Weak transcription Gastric stomach
28 chr6:25297400-25304600 Weak transcription Left Ventricle heart
29 chr6:25297600-25300800 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr6:25297600-25301800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr6:25297800-25301200 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr6:25297800-25301200 Weak transcription Brain Angular Gyrus brain
33 chr6:25297800-25301200 Weak transcription Fetal Thymus thymus
34 chr6:25297800-25301200 Weak transcription Thymus Thymus
35 chr6:25297800-25302400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr6:25298000-25300600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr6:25298000-25300600 Weak transcription Duodenum Mucosa Duodenum
38 chr6:25298000-25300800 Weak transcription Small Intestine intestine
39 chr6:25298000-25301200 Weak transcription Fetal Intestine Small intestine
40 chr6:25298000-25301400 Weak transcription NHDF-Ad bronchial
41 chr6:25298000-25301800 Weak transcription Stomach Mucosa stomach
42 chr6:25298000-25302400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr6:25298000-25302400 Weak transcription Ovary ovary
44 chr6:25298000-25302800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr6:25298000-25302800 Weak transcription Placenta Amnion Placenta Amnion
46 chr6:25298000-25303200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr6:25298000-25311800 Weak transcription Stomach Smooth Muscle stomach
48 chr6:25298200-25300800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr6:25298200-25301000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr6:25298200-25301200 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015