Variant report

Variant	rs9692838
Chromosome Location	chr8:38815694-38815695
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:38809924..38812922-chr8:38812985..38815892,2	MCF-7	breast:
2	chr8:38809690..38812005-chr8:38814364..38816596,2	K562	blood:
3	chr8:38804154..38807447-chr8:38813354..38816300,3	K562	blood:
4	chr8:38808571..38813018-chr8:38815096..38820792,6	K562	blood:
5	chr8:38815665..38817744-chr8:38826216..38828410,2	K562	blood:
6	chr8:38814756..38818427-chr8:38822560..38824207,3	K562	blood:

Variant related genes	Relation type
ENSG00000169499	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10958812	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4301415	0.85[EUR][1000 genomes]
rs4404880	0.87[EUR][1000 genomes]
rs4733893	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4733958	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6981759	0.80[EUR][1000 genomes]
rs6985572	0.85[EUR][1000 genomes]
rs7295	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9987126	0.85[EUR][1000 genomes]

No data

Chromatin state (count:105 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:38795800-38830600	Weak transcription	Fetal Kidney	kidney
2	chr8:38797000-38831200	Weak transcription	Psoas Muscle	Psoas
3	chr8:38798800-38820600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr8:38799000-38820800	Strong transcription	Stomach Smooth Muscle	stomach
5	chr8:38799000-38822000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr8:38799600-38821200	Strong transcription	Hela-S3	cervix
7	chr8:38800000-38820000	Strong transcription	Fetal Stomach	stomach
8	chr8:38800400-38822800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr8:38801600-38819200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
10	chr8:38801600-38819600	Strong transcription	Primary T helper cells fromperipheralblood	blood
11	chr8:38801800-38818200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
12	chr8:38802000-38817800	Strong transcription	Primary T cells from cord blood	blood
13	chr8:38802600-38817000	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
14	chr8:38802600-38819600	Strong transcription	Primary T cells fromperipheralblood	blood
15	chr8:38802800-38818200	Strong transcription	Primary T helper cells PMA-I stimulated	--
16	chr8:38802800-38831000	Weak transcription	K562	blood
17	chr8:38803800-38816200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
18	chr8:38805600-38818800	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr8:38806000-38817600	Strong transcription	Thymus	Thymus
20	chr8:38806200-38820200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr8:38806600-38820200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr8:38806800-38817200	Strong transcription	Liver	Liver
23	chr8:38807000-38820200	Strong transcription	Fetal Lung	lung
24	chr8:38807200-38817400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr8:38807200-38818800	Strong transcription	Dnd41	blood
26	chr8:38807600-38818000	Strong transcription	Fetal Intestine Large	intestine
27	chr8:38807800-38817400	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr8:38807800-38820000	Strong transcription	Fetal Intestine Small	intestine
29	chr8:38808000-38818800	Strong transcription	Primary T killer naive cells fromperipheralblood	blood
30	chr8:38808200-38817000	Strong transcription	Esophagus	oesophagus
31	chr8:38808200-38817800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr8:38808200-38819600	Strong transcription	Primary T helper naive cells from peripheral blood	blood
33	chr8:38808400-38817600	Strong transcription	Primary T helper memory cells from peripheral blood 2	blood
34	chr8:38809000-38818600	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr8:38809000-38820200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
36	chr8:38809400-38820600	Strong transcription	Placenta Amnion	Placenta Amnion
37	chr8:38809600-38817200	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood
38	chr8:38809600-38820000	Strong transcription	HMEC	breast
39	chr8:38810000-38817600	Strong transcription	NHEK	skin
40	chr8:38810200-38831000	Weak transcription	H9 Cell Line	embryonic stem cell
41	chr8:38811000-38816400	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
42	chr8:38811800-38815800	Weak transcription	Small Intestine	intestine
43	chr8:38811800-38819800	Weak transcription	Fetal Heart	heart
44	chr8:38811800-38823800	Weak transcription	Fetal Brain Male	brain
45	chr8:38812000-38817400	Weak transcription	A549	lung
46	chr8:38812200-38816000	Weak transcription	Aorta	Aorta
47	chr8:38813200-38817400	Weak transcription	NHDF-Ad	bronchial
48	chr8:38813200-38817600	Strong transcription	Colonic Mucosa	Colon
49	chr8:38813600-38816200	Genic enhancers	Fetal Muscle Leg	muscle
50	chr8:38813600-38816400	Genic enhancers	Adipose Nuclei	Adipose

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