Variant report

Variant rs972008
Chromosome Location chr5:40905314-40905315
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:40897000-40906200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr5:40903200-40906200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr5:40903600-40905600 Enhancers Liver Liver
4 chr5:40903600-40906600 Enhancers Ovary ovary
5 chr5:40903800-40905600 Enhancers Adipose Nuclei Adipose
6 chr5:40903800-40906000 Enhancers Fetal Heart heart
7 chr5:40904200-40905400 Enhancers HUES64 Cell Line embryonic stem cell
8 chr5:40904200-40905600 Enhancers Duodenum Smooth Muscle Duodenum
9 chr5:40904200-40905600 Enhancers Fetal Lung lung
10 chr5:40904400-40905400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr5:40904400-40905400 Enhancers HUES48 Cell Line embryonic stem cell
12 chr5:40904400-40905400 Enhancers Psoas Muscle Psoas
13 chr5:40904400-40905400 Enhancers Skeletal Muscle Female skeletal muscle
14 chr5:40904400-40905400 Enhancers Stomach Mucosa stomach
15 chr5:40904400-40907000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
16 chr5:40904600-40905400 Enhancers iPS-15b Cell Line embryonic stem cell
17 chr5:40904600-40909600 Weak transcription Colon Smooth Muscle Colon
18 chr5:40904800-40905800 Enhancers HepG2 liver
19 chr5:40905000-40905400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr5:40905000-40905400 Enhancers Aorta Aorta
21 chr5:40905000-40905400 Enhancers Brain Anterior Caudate brain
22 chr5:40905000-40905400 Enhancers Brain Cingulate Gyrus brain
23 chr5:40905000-40905400 Enhancers Stomach Smooth Muscle stomach
24 chr5:40905000-40905600 Enhancers Brain Hippocampus Middle brain
25 chr5:40905000-40905600 Enhancers Fetal Intestine Large intestine
26 chr5:40905000-40905600 Enhancers Rectal Mucosa Donor 31 rectum
27 chr5:40905200-40905400 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr5:40905200-40905400 Enhancers Gastric stomach
29 chr5:40905200-40905400 Enhancers Pancreas Pancrea
30 chr5:40905200-40905400 Enhancers Right Atrium heart
31 chr5:40905200-40905600 Enhancers Duodenum Mucosa Duodenum
32 chr5:40905200-40907400 Enhancers Fetal Intestine Small intestine
33 chr5:40905200-40909000 Weak transcription Fetal Kidney kidney

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