Variant report

Variant	rs9804531
Chromosome Location	chr11:76849249-76849250
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:76848078..76851010-chr11:76857507..76859793,2	K562	blood:
2	chr11:76842579..76845567-chr11:76848204..76849848,2	MCF-7	breast:
3	chr11:76842893..76845695-chr11:76847160..76849297,3	K562	blood:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs55703321	1.00[AMR][1000 genomes]
rs55704636	1.00[AMR][1000 genomes]
rs56350632	1.00[AMR][1000 genomes]
rs56366003	1.00[AMR][1000 genomes]
rs57689898	1.00[AMR][1000 genomes]
rs59296116	1.00[AMR][1000 genomes]
rs59877692	1.00[AMR][1000 genomes]
rs61000315	1.00[AMR][1000 genomes]
rs61056520	1.00[AMR][1000 genomes]
rs61086262	1.00[AMR][1000 genomes]
rs61665044	1.00[AMR][1000 genomes]
rs73493631	1.00[AMR][1000 genomes]
rs7941242	1.00[AMR][1000 genomes]
rs7942088	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1816632	chr11:76751285-76927014	Enhancers Bivalent Enhancer Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76839800-76851400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:76842800-76851200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr11:76842800-76851200	Weak transcription	Pancreas	Pancrea
4	chr11:76847600-76858400	Genic enhancers	Fetal Intestine Small	intestine
5	chr11:76847800-76850800	Weak transcription	HSMM	muscle
6	chr11:76847800-76852400	Weak transcription	Osteobl	bone
7	chr11:76848000-76849800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr11:76848000-76850600	Weak transcription	Ovary	ovary
9	chr11:76848200-76850000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
10	chr11:76848200-76850400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
11	chr11:76848200-76850800	Bivalent Enhancer	Fetal Muscle Leg	muscle
12	chr11:76848200-76851400	Weak transcription	Gastric	stomach
13	chr11:76848400-76851200	Weak transcription	Duodenum Mucosa	Duodenum
14	chr11:76848600-76849400	Enhancers	Psoas Muscle	Psoas
15	chr11:76848600-76849800	Bivalent Enhancer	Fetal Intestine Large	intestine
16	chr11:76848600-76851800	Enhancers	Right Ventricle	heart
17	chr11:76848800-76849400	Weak transcription	Esophagus	oesophagus
18	chr11:76848800-76849600	Bivalent Enhancer	Stomach Smooth Muscle	stomach
19	chr11:76848800-76849600	Active TSS	Spleen	Spleen
20	chr11:76848800-76850800	Weak transcription	HepG2	liver
21	chr11:76848800-76851200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr11:76848800-76853800	Weak transcription	Liver	Liver
23	chr11:76849000-76849400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr11:76849000-76849600	Enhancers	Primary B cells from cord blood	blood
25	chr11:76849000-76849600	Enhancers	Primary hematopoietic stem cells	blood
26	chr11:76849000-76849600	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr11:76849000-76849600	Bivalent Enhancer	Fetal Brain Male	brain
28	chr11:76849000-76849600	Bivalent/Poised TSS	Fetal Brain Female	brain
29	chr11:76849200-76849400	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
30	chr11:76849200-76849400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr11:76849200-76849400	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr11:76849200-76849600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr11:76849200-76849600	Bivalent Enhancer	Placenta Amnion	Placenta Amnion

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