Variant report

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10935097	0.94[EUR][1000 genomes]
rs1131262	0.85[ASN][1000 genomes]
rs13068409	0.87[EUR][1000 genomes]
rs35015318	0.87[EUR][1000 genomes]
rs3890774	0.84[ASN][1000 genomes]
rs4072180	0.93[ASN][1000 genomes]
rs4280635	0.87[EUR][1000 genomes]
rs4324466	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4682664	0.86[ASN][1000 genomes]
rs4682666	0.86[ASN][1000 genomes]
rs4682668	0.85[ASN][1000 genomes]
rs4682669	0.83[ASN][1000 genomes]
rs56073423	0.85[ASN][1000 genomes]
rs6439465	0.90[ASN][1000 genomes]
rs6439466	0.90[ASN][1000 genomes]
rs6762690	0.90[ASN][1000 genomes]
rs6776502	0.86[ASN][1000 genomes]
rs6786384	0.86[EUR][1000 genomes]
rs6800143	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6808085	0.85[ASN][1000 genomes]
rs7609611	0.85[ASN][1000 genomes]
rs7622046	0.85[ASN][1000 genomes]
rs9283588	0.89[ASN][1000 genomes]
rs9818714	0.85[ASN][1000 genomes]
rs9823873	0.85[ASN][1000 genomes]
rs9825808	0.85[ASN][1000 genomes]
rs9832732	0.85[ASN][1000 genomes]
rs9839819	0.85[ASN][1000 genomes]
rs9840170	0.94[EUR][1000 genomes]
rs9846871	0.90[EUR][1000 genomes]
rs9853568	0.86[ASN][1000 genomes]
rs9856298	0.85[ASN][1000 genomes]
rs9856792	0.85[ASN][1000 genomes]
rs9858069	0.85[ASN][1000 genomes]
rs9858450	0.85[ASN][1000 genomes]
rs9858707	0.85[ASN][1000 genomes]
rs9860060	0.89[EUR][1000 genomes]
rs9860268	0.89[EUR][1000 genomes]
rs9877899	0.89[EUR][1000 genomes]
rs9882590	0.87[EUR][1000 genomes]
rs9882927	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv965344	chr3:133805086-133862489	Enhancers ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133820200-133821000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr3:133820400-133820800	ZNF genes & repeats	Gastric	stomach
3	chr3:133820600-133821000	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr3:133820600-133821000	ZNF genes & repeats	Right Atrium	heart
5	chr3:133820600-133821400	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell

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