Variant report
Variant | rs9813342 |
---|---|
Chromosome Location | chr3:24976421-24976422 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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(count:2 , 50 per page) page:
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rs_ID | r2[population] |
---|---|
rs12107912 | 1.00[AMR][1000 genomes] |
rs6787744 | 1.00[AMR][1000 genomes] |
rs6808328 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73137222 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73137228 | 1.00[AMR][1000 genomes] |
rs73137245 | 1.00[AMR][1000 genomes] |
rs73137259 | 1.00[AFR][1000 genomes] |
rs73137283 | 0.90[AFR][1000 genomes] |
rs9813773 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9835325 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9848164 | 0.90[AFR][1000 genomes] |
rs9848183 | 0.90[AFR][1000 genomes] |
rs9863730 | 0.90[AFR][1000 genomes] |
rs9873969 | 0.88[AFR][1000 genomes] |
rs9874500 | 0.90[AFR][1000 genomes] |
rs9881889 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv589953 | chr3:24909003-25004804 | Enhancers Weak transcription Bivalent Enhancer Active TSS | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
2 | nsv876630 | chr3:24911917-25066711 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
3 | nsv834644 | chr3:24936987-25112610 | Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
4 | nsv460482 | chr3:24966768-25071616 | Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
5 | nsv589954 | chr3:24966768-25071616 | Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS | TF binding regionChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
6 | nsv1008974 | chr3:24968434-24992497 | Weak transcription Enhancers Bivalent Enhancer | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:24976400-24976600 | Enhancers | Fetal Kidney | kidney |
2 | chr3:24976400-24977600 | Enhancers | Fetal Lung | lung |