Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11706266	0.90[ASN][1000 genomes]
rs11918092	0.89[JPT][hapmap]
rs13093017	0.90[ASN][1000 genomes]
rs1374813	0.96[ASN][1000 genomes]
rs1900625	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2138212	0.90[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs2400303	0.91[ASN][1000 genomes]
rs3732568	0.89[JPT][hapmap]
rs4955451	0.96[ASN][1000 genomes]
rs4955490	0.96[ASN][1000 genomes]
rs4955492	0.96[ASN][1000 genomes]
rs4955493	0.96[ASN][1000 genomes]
rs4955494	0.96[ASN][1000 genomes]
rs6439517	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs6779220	0.90[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs720363	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs935511	0.96[ASN][1000 genomes]
rs9825708	0.85[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs9825801	0.83[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs9828197	0.96[ASN][1000 genomes]
rs9845878	0.99[ASN][1000 genomes]
rs9875834	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877515	chr3:134460368-134591138	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134498400-134499400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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