Variant report
| Variant | rs9841798 |
|---|---|
| Chromosome Location | chr3:105554198-105554199 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:105483200-105555200 | Weak transcription | Placenta | Placenta |
| 2 | chr3:105511400-105566400 | Weak transcription | Aorta | Aorta |
| 3 | chr3:105532200-105563000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 4 | chr3:105533600-105560600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 5 | chr3:105533800-105570000 | Weak transcription | Dnd41 | blood |
| 6 | chr3:105534200-105566200 | Weak transcription | Brain Germinal Matrix | brain |
| 7 | chr3:105540800-105569600 | Weak transcription | Fetal Thymus | thymus |
| 8 | chr3:105541000-105554400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 9 | chr3:105542600-105555400 | Weak transcription | Brain Angular Gyrus | brain |
| 10 | chr3:105542600-105566000 | Weak transcription | Fetal Stomach | stomach |
| 11 | chr3:105542800-105554400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 12 | chr3:105543000-105555600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 13 | chr3:105543400-105555800 | Weak transcription | HepG2 | liver |
| 14 | chr3:105543400-105560800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 15 | chr3:105543400-105581200 | Weak transcription | Gastric | stomach |
| 16 | chr3:105543600-105557200 | Weak transcription | Fetal Intestine Large | intestine |
| 17 | chr3:105543800-105571000 | Weak transcription | Lung | lung |
| 18 | chr3:105544000-105554400 | Weak transcription | Fetal Lung | lung |
| 19 | chr3:105544200-105554400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 20 | chr3:105544200-105559200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 21 | chr3:105544200-105584600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 22 | chr3:105546600-105586200 | Weak transcription | Esophagus | oesophagus |
| 23 | chr3:105546800-105560800 | Weak transcription | Fetal Muscle Leg | muscle |
| 24 | chr3:105547200-105554600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 25 | chr3:105547200-105554800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 26 | chr3:105547200-105554800 | Weak transcription | Ovary | ovary |
| 27 | chr3:105547200-105555000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 28 | chr3:105547200-105557400 | Weak transcription | Fetal Intestine Small | intestine |
| 29 | chr3:105547400-105554400 | Weak transcription | NH-A | brain |
| 30 | chr3:105547400-105557200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 31 | chr3:105547800-105554600 | Weak transcription | HMEC | breast |
| 32 | chr3:105547800-105554800 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 33 | chr3:105547800-105555400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 34 | chr3:105547800-105557400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 35 | chr3:105548400-105561200 | Weak transcription | K562 | blood |
| 36 | chr3:105548400-105561400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr3:105548600-105559600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 38 | chr3:105549000-105554600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 39 | chr3:105549000-105555000 | Weak transcription | Right Ventricle | heart |
| 40 | chr3:105549000-105560800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 41 | chr3:105549000-105571800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 42 | chr3:105549200-105555400 | Weak transcription | Psoas Muscle | Psoas |
| 43 | chr3:105549200-105564400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 44 | chr3:105549400-105557200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 45 | chr3:105549600-105558000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 46 | chr3:105549800-105554600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 47 | chr3:105549800-105554600 | Weak transcription | Stomach Mucosa | stomach |
| 48 | chr3:105549800-105556000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 49 | chr3:105550000-105562600 | Weak transcription | HUVEC | blood vessel |
| 50 | chr3:105550000-105569600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
