Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:43146026..43148649-chr3:43173688..43176557,2	K562	blood:

Variant related genes	Relation type
ENSG00000144647	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1125065	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs11925735	0.95[ASN][1000 genomes]
rs12495981	0.97[ASN][1000 genomes]
rs13327174	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17405306	0.94[ASN][1000 genomes]
rs17470866	0.95[ASN][1000 genomes]
rs2008369	0.82[ASN][1000 genomes]
rs2372336	0.96[ASN][1000 genomes]
rs57507574	0.96[ASN][1000 genomes]
rs58512215	0.93[ASN][1000 genomes]
rs73083260	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73084637	0.90[ASN][1000 genomes]
rs73084642	0.97[ASN][1000 genomes]
rs73084648	0.89[ASN][1000 genomes]
rs73084651	0.96[ASN][1000 genomes]
rs73084652	0.96[ASN][1000 genomes]
rs7625507	0.86[ASN][1000 genomes]
rs9810300	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9830244	0.83[EUR][1000 genomes]
rs9848658	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834672	chr3:43132722-43306272	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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