Variant report

Variant	rs9865444
Chromosome Location	chr3:155871185-155871186
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs13318658	1.00[AMR][1000 genomes]
rs6807422	1.00[AMR][1000 genomes]
rs73012228	1.00[AMR][1000 genomes]
rs7634784	1.00[AMR][1000 genomes]
rs9823385	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9825048	1.00[AMR][1000 genomes]
rs9856623	1.00[AMR][1000 genomes]
rs9868426	1.00[AMR][1000 genomes]
rs9869978	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv592085	chr3:155827634-156012679	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:155868600-155873200	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr3:155870200-155871400	Weak transcription	Pancreas	Pancrea
3	chr3:155870200-155874200	Weak transcription	Left Ventricle	heart
4	chr3:155870200-155875800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr3:155870200-155876400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr3:155870400-155917800	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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