The 2.0 version of rSNPBase

Variant report

Variant rs9868582
Chromosome Location chr3:112052927-112052928
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112050600-112054200 Active TSS Breast Myoepithelial Primary Cells Breast
2 chr3:112050800-112054200 Active TSS Brain Inferior Temporal Lobe brain
3 chr3:112051000-112053600 Active TSS iPS-20b Cell Line embryonic stem cell
4 chr3:112051000-112053800 Active TSS HUES6 Cell Line embryonic stem cell
5 chr3:112051000-112054000 Active TSS ES-I3 Cell Line embryonic stem cell
6 chr3:112051000-112054200 Active TSS Placenta Placenta
7 chr3:112051400-112053400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
8 chr3:112051400-112053600 Active TSS HUES48 Cell Line embryonic stem cell
9 chr3:112051400-112053600 Active TSS HUES64 Cell Line embryonic stem cell
10 chr3:112051400-112053600 Active TSS iPS-15b Cell Line embryonic stem cell
11 chr3:112051400-112054200 Active TSS Fetal Brain Female brain
12 chr3:112051400-112054200 Active TSS Rectal Mucosa Donor 29 rectum
13 chr3:112051400-112054400 Active TSS Primary hematopoietic stem cells short term culture blood
14 chr3:112051400-112054400 Active TSS GM12878-XiMat blood
15 chr3:112051400-112054600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
16 chr3:112051600-112053000 Active TSS Primary hematopoietic stem cells blood
17 chr3:112051600-112053000 Active TSS Primary T helper cells PMA-I stimulated --
18 chr3:112051600-112053000 Active TSS Primary T killer memory cells from peripheral blood blood
19 chr3:112051600-112053000 Active TSS Cortex derived primary cultured neurospheres brain
20 chr3:112051600-112053200 Active TSS iPS-18 Cell Line embryonic stem cell
21 chr3:112051600-112053200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
22 chr3:112051600-112053200 Flanking Active TSS Adipose Nuclei Adipose
23 chr3:112051600-112053200 Active TSS Brain Anterior Caudate brain
24 chr3:112051600-112053200 Bivalent/Poised TSS Fetal Intestine Large intestine
25 chr3:112051600-112053200 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
26 chr3:112051600-112053200 Bivalent/Poised TSS Osteobl bone
27 chr3:112051600-112053400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
28 chr3:112051600-112053600 Active TSS H1 Cell Line embryonic stem cell
29 chr3:112051600-112053600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
30 chr3:112051600-112053600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr3:112051600-112053600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:112051600-112053600 Active TSS Brain Substantia Nigra brain
33 chr3:112051600-112053600 ZNF genes & repeats Fetal Brain Male brain
34 chr3:112051600-112053600 Active TSS Fetal Thymus thymus
35 chr3:112051600-112053600 Active TSS Rectal Mucosa Donor 31 rectum
36 chr3:112051600-112053800 Active TSS H9 Cell Line embryonic stem cell
37 chr3:112051600-112053800 Active TSS Fetal Intestine Small intestine
38 chr3:112051600-112054000 Active TSS Aorta Aorta
39 chr3:112051600-112054000 Active TSS Fetal Kidney kidney
40 chr3:112051600-112054000 Active TSS Fetal Lung lung
41 chr3:112051600-112054000 Active TSS Ovary ovary
42 chr3:112051600-112054200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr3:112051600-112054200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr3:112051600-112054200 Active TSS Pancreatic Islets Pancreatic Islet
45 chr3:112051600-112054200 Active TSS Thymus Thymus
46 chr3:112051600-112054400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr3:112051600-112054400 Flanking Active TSS Primary B cells from cord blood blood
48 chr3:112051600-112054400 Active TSS Brain Angular Gyrus brain
49 chr3:112051600-112054400 Active TSS Brain Hippocampus Middle brain
50 chr3:112051600-112054400 Active TSS Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015