The 2.0 version of rSNPBase

Variant report

Variant rs9878734
Chromosome Location chr3:178782455-178782456
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:178746000-178784000 Weak transcription Liver Liver
2 chr3:178746000-178785200 Weak transcription Thymus Thymus
3 chr3:178753600-178784800 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr3:178755600-178787800 Weak transcription Aorta Aorta
5 chr3:178756000-178783600 Weak transcription NHDF-Ad bronchial
6 chr3:178756600-178783800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr3:178756800-178788400 Weak transcription Fetal Intestine Small intestine
8 chr3:178756800-178788800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr3:178764200-178787000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr3:178764400-178784600 Weak transcription K562 blood
11 chr3:178764800-178785200 Weak transcription Pancreas Pancrea
12 chr3:178764800-178787200 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr3:178764800-178789000 Weak transcription Lung lung
14 chr3:178765000-178785400 Weak transcription Gastric stomach
15 chr3:178765000-178786800 Weak transcription Dnd41 blood
16 chr3:178765200-178784600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr3:178765200-178789000 Weak transcription Spleen Spleen
18 chr3:178768400-178784000 Weak transcription HUVEC blood vessel
19 chr3:178768400-178788800 Weak transcription Small Intestine intestine
20 chr3:178768600-178788800 Weak transcription Placenta Placenta
21 chr3:178769200-178784000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr3:178769800-178783800 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr3:178770000-178783800 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr3:178770200-178784800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr3:178770600-178784800 Weak transcription Fetal Muscle Trunk muscle
26 chr3:178770800-178783800 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr3:178771000-178788400 Weak transcription H1 Cell Line embryonic stem cell
28 chr3:178771600-178784800 Strong transcription Cortex derived primary cultured neurospheres brain
29 chr3:178772000-178786800 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr3:178772600-178782600 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr3:178772600-178788800 Weak transcription Esophagus oesophagus
32 chr3:178773600-178788600 Weak transcription Fetal Stomach stomach
33 chr3:178773800-178784600 Weak transcription Fetal Muscle Leg muscle
34 chr3:178774000-178782800 Weak transcription Primary monocytes fromperipheralblood blood
35 chr3:178774000-178784000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr3:178774400-178784600 Weak transcription Fetal Intestine Large intestine
37 chr3:178775000-178786000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr3:178776000-178784000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr3:178776000-178784000 Weak transcription Adipose Nuclei Adipose
40 chr3:178776000-178784800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr3:178777800-178788400 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr3:178778000-178783800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr3:178778200-178788600 Weak transcription Primary hematopoietic stem cells blood
44 chr3:178778400-178785600 Strong transcription Osteobl bone
45 chr3:178779000-178785600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr3:178779200-178787800 Weak transcription Fetal Brain Male brain
47 chr3:178779800-178787200 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr3:178780000-178785600 Strong transcription Primary B cells from peripheral blood blood
49 chr3:178780000-178786000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr3:178780200-178785200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015