Variant report

Variant rs9888248
Chromosome Location chr11:83405433-83405434
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:83401400-83405800 Enhancers Fetal Heart heart
2 chr11:83402000-83405800 Enhancers Brain Hippocampus Middle brain
3 chr11:83402000-83407200 Enhancers Brain Anterior Caudate brain
4 chr11:83402200-83406600 Enhancers Brain Substantia Nigra brain
5 chr11:83402800-83405800 Enhancers Fetal Lung lung
6 chr11:83402800-83409800 Weak transcription Psoas Muscle Psoas
7 chr11:83402800-83413000 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr11:83403000-83409800 Weak transcription Pancreas Pancrea
9 chr11:83403800-83406000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr11:83403800-83406000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr11:83403800-83406000 Enhancers HUES64 Cell Line embryonic stem cell
12 chr11:83404200-83405600 Enhancers HUES48 Cell Line embryonic stem cell
13 chr11:83404200-83405600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr11:83404200-83405800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr11:83404200-83406000 Enhancers Brain Cingulate Gyrus brain
16 chr11:83404400-83405600 Enhancers iPS-20b Cell Line embryonic stem cell
17 chr11:83404400-83405800 Enhancers ES-WA7 Cell Line embryonic stem cell
18 chr11:83404400-83405800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr11:83404400-83406000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
20 chr11:83404400-83406000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
21 chr11:83404400-83406000 Enhancers HMEC breast
22 chr11:83404600-83405600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr11:83404600-83405600 Enhancers Fetal Intestine Small intestine
24 chr11:83404600-83406200 Enhancers Duodenum Mucosa Duodenum
25 chr11:83404800-83405600 Enhancers HUES6 Cell Line embryonic stem cell
26 chr11:83404800-83405800 Enhancers ES-I3 Cell Line embryonic stem cell
27 chr11:83404800-83405800 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr11:83405000-83406000 Enhancers Fetal Intestine Large intestine
29 chr11:83405000-83406000 Enhancers NHEK skin
30 chr11:83405200-83405600 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr11:83405200-83405600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr11:83405200-83405600 Enhancers Fetal Muscle Leg muscle
33 chr11:83405200-83405600 Enhancers Stomach Mucosa stomach
34 chr11:83405200-83405800 Enhancers Primary hematopoietic stem cells blood
35 chr11:83405400-83405600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
36 chr11:83405400-83405600 Enhancers HUVEC blood vessel
37 chr11:83405400-83405800 Active TSS Brain Angular Gyrus brain
38 chr11:83405400-83405800 Active TSS Brain Inferior Temporal Lobe brain
39 chr11:83405400-83406000 Enhancers Small Intestine intestine
40 chr11:83405400-83406600 Active TSS Pancreatic Islets Pancreatic Islet
41 chr11:83405400-83417400 Weak transcription Hela-S3 cervix

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