Variant report

Variant rs9905513
Chromosome Location chr17:17594539-17594540
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17587200-17594600 Weak transcription Psoas Muscle Psoas
2 chr17:17587200-17597000 Weak transcription HSMMtube muscle
3 chr17:17589400-17594600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr17:17589400-17595600 Weak transcription Brain Substantia Nigra brain
5 chr17:17589400-17595600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr17:17589600-17594800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr17:17589600-17595000 Weak transcription Small Intestine intestine
8 chr17:17590200-17594600 Weak transcription Brain Anterior Caudate brain
9 chr17:17590200-17594600 Weak transcription Brain Cingulate Gyrus brain
10 chr17:17590200-17594600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr17:17590200-17594600 Weak transcription HSMM muscle
12 chr17:17590200-17595000 Weak transcription Adipose Nuclei Adipose
13 chr17:17590200-17597600 Weak transcription Ovary ovary
14 chr17:17590600-17595000 Weak transcription Colonic Mucosa Colon
15 chr17:17590600-17597600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr17:17590800-17594600 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr17:17590800-17594600 Weak transcription Colon Smooth Muscle Colon
18 chr17:17590800-17594600 Weak transcription Right Atrium heart
19 chr17:17590800-17595000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr17:17590800-17595000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr17:17590800-17595800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr17:17591000-17594600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr17:17591000-17594600 Weak transcription Fetal Kidney kidney
24 chr17:17591000-17595400 Weak transcription Esophagus oesophagus
25 chr17:17591000-17595600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr17:17591400-17595000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr17:17591800-17594600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr17:17591800-17594800 Enhancers HepG2 liver
29 chr17:17592200-17597200 Enhancers Fetal Intestine Large intestine
30 chr17:17592400-17595400 Genic enhancers Fetal Intestine Small intestine
31 chr17:17592400-17596400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
32 chr17:17592600-17595000 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr17:17592600-17595400 Enhancers A549 lung
34 chr17:17592600-17596400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr17:17592600-17596800 Enhancers Duodenum Mucosa Duodenum
36 chr17:17592600-17597000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr17:17592600-17597200 Enhancers Stomach Mucosa stomach
38 chr17:17593000-17594600 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr17:17593000-17594800 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr17:17593000-17596600 Enhancers Monocytes-CD14+_RO01746 blood
41 chr17:17593000-17597000 Enhancers Primary T cells from cord blood blood
42 chr17:17593000-17597200 Enhancers Primary hematopoietic stem cells blood
43 chr17:17593000-17597200 Enhancers Thymus Thymus
44 chr17:17593000-17597600 Enhancers Fetal Thymus thymus
45 chr17:17593200-17594600 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr17:17593200-17594600 Weak transcription Stomach Smooth Muscle stomach
47 chr17:17593200-17594600 Enhancers NHEK skin
48 chr17:17593200-17597200 Enhancers Fetal Adrenal Gland Adrenal Gland
49 chr17:17593200-17597200 Enhancers Left Ventricle heart
50 chr17:17593200-17597400 Enhancers Primary T cells fromperipheralblood blood

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