Variant report

Variant	rs9969061
Chromosome Location	chr6:71862393-71862394
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10945292	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11965581	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12110901	1.00[EUR][1000 genomes]
rs12111243	1.00[EUR][1000 genomes]
rs16881007	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4340962	1.00[CEU][hapmap]
rs55666367	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56131215	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56161362	1.00[EUR][1000 genomes]
rs56192260	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56365444	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59282007	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59358439	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59600420	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59693971	1.00[AMR][1000 genomes]
rs60100541	1.00[AMR][1000 genomes]
rs60222660	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60316641	1.00[EUR][1000 genomes]
rs61498740	1.00[EUR][1000 genomes]
rs6907270	1.00[EUR][1000 genomes]
rs6916069	1.00[EUR][1000 genomes]
rs6916241	1.00[EUR][1000 genomes]
rs6927030	1.00[EUR][1000 genomes]
rs6930158	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73497926	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73497994	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73498002	1.00[EUR][1000 genomes]
rs73498904	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73498909	1.00[EUR][1000 genomes]
rs73499815	1.00[EUR][1000 genomes]
rs73499826	1.00[EUR][1000 genomes]
rs73746981	1.00[AMR][1000 genomes]
rs73746987	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73746995	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73746997	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73746998	0.93[AFR][1000 genomes]
rs73749806	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73749809	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7738396	1.00[EUR][1000 genomes]
rs7756861	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7762477	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7771883	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv17967	chr6:71860706-71862638	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71856400-71863600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr6:71862000-71863200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr6:71862000-71868000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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