Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10012201	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10018673	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11931393	0.83[EUR][1000 genomes]
rs13145731	0.82[EUR][1000 genomes]
rs1442909	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2331976	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4362782	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4487305	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4593091	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs55947842	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6553536	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6827875	0.93[ASN][1000 genomes]
rs6828494	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6828756	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6844817	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7654851	0.83[EUR][1000 genomes]
rs7680601	0.82[EUR][1000 genomes]
rs7681130	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7684621	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9995101	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9997272	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv596167	chr4:171576294-171672038	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:171602600-171605400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:171604400-171605400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr4:171604400-171605400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr4:171604400-171605400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr4:171604400-171605600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr4:171604400-171605600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr4:171604400-171605600	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr4:171604600-171605600	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr4:171604600-171605600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr4:171604800-171605200	Weak transcription	HUES48 Cell Line	embryonic stem cell

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