Variant report

Variant	esv1808096
Chromosome Location	chr19:37463582-37464848
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:223)
CpG islands
(count:305)
Chromatin interactive
region (count:1)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:223 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr19:37463900-37464527	H1-hESC	embryonic stem cell:	n/a	n/a
2	BHLHE40	chr19:37464284-37464443	GM12878	blood:	n/a	n/a
3	CHD2	chr19:37464260-37464560	H1-hESC	embryonic stem cell:	n/a	n/a
4	CTCF	chr19:37464380-37464530	HFF-Myc	foreskin:	n/a	n/a
5	CTCF	chr19:37464282-37464525	Medullo	brain:	n/a	n/a
6	CTCF	chr19:37464122-37464509	LNCaP	prostate:	n/a	n/a
7	CTCF	chr19:37464142-37464500	SK-N-SH_RA	brain:	n/a	n/a
8	CTCF	chr19:37464300-37464450	HMEC	breast:	n/a	n/a
9	CTCF	chr19:37463780-37463930	HRE	kidney:	n/a	n/a
10	CTCF	chr19:37463820-37463970	GM12866	blood:	n/a	n/a
11	CTCF	chr19:37464193-37464488	SK-N-SH_RA	brain:	n/a	n/a
12	CTCF	chr19:37463913-37464732	MCF-7	breast:	n/a	chr19:37464018-37464027 chr19:37464014-37464027
13	CTCF	chr19:37464202-37464501	GM19240	blood:	n/a	n/a
14	CTCF	chr19:37464320-37464470	HRPEpiC	eye:	n/a	n/a
15	CTCF	chr19:37464280-37464430	GM12875	blood:	n/a	n/a
16	CTCF	chr19:37464380-37464530	GM06990	blood:	n/a	n/a
17	CTCF	chr19:37464240-37464390	GM12865	blood:	n/a	n/a
18	CTCF	chr19:37464280-37464430	SK-N-SH_RA	brain:	n/a	n/a
19	CTCF	chr19:37464260-37464410	GM12868	blood:	n/a	n/a
20	CTCF	chr19:37464024-37464598	GM12878	blood:	n/a	n/a
21	CTCF	chr19:37464260-37464410	HFF	foreskin:	n/a	n/a
22	CTCF	chr19:37464049-37464585	IMR90	lung:	n/a	n/a
23	CTCF	chr19:37464240-37464390	WI-38	lung:	n/a	n/a
24	CTCF	chr19:37464280-37464430	HPF	lung:	n/a	n/a
25	CTCF	chr19:37464300-37464450	NHLF	lung:	n/a	n/a
26	CTCF	chr19:37464320-37464470	HPAF	blood vessel:	n/a	n/a
27	CTCF	chr19:37464340-37464490	HFF-Myc	foreskin:	n/a	n/a
28	CTCF	chr19:37464071-37464099	LNCaP	prostate:	n/a	n/a
29	CTCF	chr19:37463940-37464090	AG04449	skin:	n/a	chr19:37464018-37464027 chr19:37464014-37464027
30	CTCF	chr19:37464240-37464390	HL-60	blood:	n/a	n/a
31	CTCF	chr19:37464360-37464510	HCM	heart:	n/a	n/a
32	CTCF	chr19:37464235-37464477	K562	blood:	n/a	n/a
33	CTCF	chr19:37464740-37464890	GM12873	blood:	n/a	n/a
34	CTCF	chr19:37464260-37464410	GM12875	blood:	n/a	n/a
35	CTCF	chr19:37463985-37463987	Lung_OC	lung:	n/a	n/a
36	CTCF	chr19:37464240-37464390	RPTEC	kidney:	n/a	n/a
37	CTCF	chr19:37464400-37464550	GM12874	blood:	n/a	n/a
38	CTCF	chr19:37464240-37464390	HAc	cerebellar:	n/a	n/a
39	CTCF	chr19:37464360-37464510	GM06990	blood:	n/a	n/a
40	CTCF	chr19:37464280-37464430	GM12867	blood:	n/a	n/a
41	CTCF	chr19:37464169-37464507	GM10248	blood:	n/a	n/a
42	CTCF	chr19:37464295-37464492	Gliobla	brain:	n/a	n/a
43	CTCF	chr19:37464240-37464390	BJ	skin:	n/a	n/a
44	CTCF	chr19:37464280-37464430	GM12871	blood:	n/a	n/a
45	CTCF	chr19:37464260-37464410	HBMEC	blood vessel:	n/a	n/a
46	CTCF	chr19:37464260-37464410	GM12878	blood:	n/a	n/a
47	CTCF	chr19:37464177-37464517	MCF-7	breast:	n/a	n/a
48	CTCF	chr19:37464142-37464521	Lung_OC	lung:	n/a	n/a
49	CTCF	chr19:37464240-37464390	GM12873	blood:	n/a	n/a
50	CTCF	chr19:37464129-37464617	K562	blood:	n/a	n/a

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:37464633-37464683	AG04450	lung:	fetal
2	chr19:37464633-37464683	Caco-2	colon:	n/a
3	chr19:37464066-37464116	NHBE	bronchial:	n/a
4	chr19:37464633-37464683	HIPEpiC	eye:	n/a
5	chr19:37464066-37464116	SAEC	small airway:	n/a
6	chr19:37464066-37464116	LNCaP	prostate:	n/a
7	chr19:37464066-37464116	RPTEC	kidney:	n/a
8	chr19:37464633-37464683	ECC-1	luminal epithelium:	n/a
9	chr19:37464066-37464116	GM12891	blood:	n/a
10	chr19:37464417-37464467	MCF-7	breast:	n/a
11	chr19:37464508-37464558	ECC-1	luminal epithelium:	n/a
12	chr19:37464198-37464248	GM12891	blood:	n/a
13	chr19:37464417-37464467	AG04449	skin:	fetal
14	chr19:37464633-37464683	HAEpiC	amniotic membrane:	n/a
15	chr19:37464508-37464558	HL-60	blood:	n/a
16	chr19:37464633-37464683	MCF-7	breast:	n/a
17	chr19:37464508-37464558	NH-A	brain:	n/a
18	chr19:37464066-37464116	AG10803	skin:	n/a
19	chr19:37464417-37464467	BE2_C	brain:	n/a
20	chr19:37464633-37464683	PANC-1	pancreas:	n/a
21	chr19:37464066-37464116	HNPCEpiC	eye:	n/a
22	chr19:37464417-37464467	HepG2	liver:	n/a
23	chr19:37464066-37464116	PFSK-1	brain:	n/a
24	chr19:37464508-37464558	HepG2	liver:	n/a
25	chr19:37464198-37464248	GM19239	blood:	n/a
26	chr19:37464417-37464467	HL-60	blood:	n/a
27	chr19:37464066-37464116	SK-N-SH	brain:	n/a
28	chr19:37464508-37464558	K562	blood:	n/a
29	chr19:37464508-37464558	HCPEpiC	choroid plexus:	n/a
30	chr19:37464508-37464558	SKMC	muscle:	n/a
31	chr19:37464508-37464558	HEK293	kidney:	embryo
32	chr19:37464417-37464467	HCT-116	colon:	n/a
33	chr19:37464198-37464248	U87	brain:	n/a
34	chr19:37464417-37464467	NB4	blood:	n/a
35	chr19:37464198-37464248	SKMC	muscle:	n/a
36	chr19:37464066-37464116	A549	lung:	n/a
37	chr19:37464198-37464248	PANC-1	pancreas:	n/a
38	chr19:37464508-37464558	PANC-1	pancreas:	n/a
39	chr19:37464633-37464683	PrEC	prostate:	n/a
40	chr19:37464417-37464467	H1-hESC	embryonic stem cell:	embryo
41	chr19:37464633-37464683	SAEC	small airway:	n/a
42	chr19:37464417-37464467	HCPEpiC	choroid plexus:	n/a
43	chr19:37464417-37464467	U87	brain:	n/a
44	chr19:37464198-37464248	HAEpiC	amniotic membrane:	n/a
45	chr19:37464508-37464558	HRPEpiC	eye:	n/a
46	chr19:37464066-37464116	K562	blood:	n/a
47	chr19:37464633-37464683	U87	brain:	n/a
48	chr19:37464508-37464558	HRE	kidney:	n/a
49	chr19:37464633-37464683	HEK293	kidney:	embryo
50	chr19:37464417-37464467	AG10803	skin:	n/a

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:37463031..37465781-chr19:37707432..37709239,2	MCF-7	breast:

No data

Variant related genes	Relation type
ZNF568	TF binding region
ZNF568	CpG island
ENSG00000245680	chromatin interactions
ENSG00000188283	chromatin interactions

Extended variants
information (count: 46 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:46 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs190383755	chr19:37463619-37463620	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs373221102	chr19:37463648-37463649	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs553943029	chr19:37463649-37463650	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs1667333	chr19:37463678-37463679	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs57080651	chr19:37463720-37463721	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs60418129	chr19:37463761-37463762	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs28608841	chr19:37463789-37463790	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs1644646	chr19:37463802-37463803	Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs28555503	chr19:37463809-37463810	Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs79642897	chr19:37463852-37463853	Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs375536579	chr19:37463867-37463868	Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs541252431	chr19:37463920-37463921	Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs139331797	chr19:37464011-37464012	Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs528308163	chr19:37464186-37464187	Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs3816387	chr19:37464212-37464213	Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs560667103	chr19:37464291-37464292	Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs1644647	chr19:37464307-37464308	Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
18	rs549754581	chr19:37464326-37464327	Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs1667334	chr19:37464348-37464349	Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs371323838	chr19:37464359-37464360	Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs1624087	chr19:37464375-37464376	Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
22	rs3816390	chr19:37464423-37464424	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs191551796	chr19:37464427-37464428	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs142528382	chr19:37464428-37464429	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs576612599	chr19:37464449-37464450	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs537002269	chr19:37464464-37464465	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs183840734	chr19:37464531-37464532	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs577463120	chr19:37464532-37464533	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs8101258	chr19:37464539-37464540	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs1625128	chr19:37464547-37464548	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs574660144	chr19:37464548-37464549	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs542043175	chr19:37464575-37464576	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs144158195	chr19:37464594-37464595	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs3816391	chr19:37464606-37464607	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs1625963	chr19:37464636-37464637	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs564943467	chr19:37464654-37464655	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs1626675	chr19:37464680-37464681	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs547679515	chr19:37464688-37464689	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs567062570	chr19:37464710-37464711	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs35143831	chr19:37464762-37464763	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs566002384	chr19:37464798-37464799	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs536404395	chr19:37464802-37464803	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs374919563	chr19:37464823-37464824	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs548411768	chr19:37464824-37464825	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs148679636	chr19:37464836-37464837	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs1667335	chr19:37464847-37464848	Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:57)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Glioma	17123091	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Wilms tumour	21544195	CNVD
Mental retardation	19951919	CNVD
19q13.11 deletion syndrome	22378287	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Ovarian neoplasms	16753589	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD

Chromatin state (count:301 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:37458000-37463600	Weak transcription	Aorta	Aorta
2	chr19:37458000-37463600	Weak transcription	Gastric	stomach
3	chr19:37458000-37463600	Weak transcription	Ovary	ovary
4	chr19:37458000-37463600	Weak transcription	Spleen	Spleen
5	chr19:37461000-37463600	Weak transcription	Liver	Liver
6	chr19:37463200-37463600	Active TSS	Primary T helper naive cells from peripheral blood	blood
7	chr19:37463200-37463600	Active TSS	Primary T helper cells PMA-I stimulated	--
8	chr19:37463200-37463600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr19:37463200-37463600	Enhancers	Duodenum Mucosa	Duodenum
10	chr19:37463200-37463600	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
11	chr19:37463200-37464000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr19:37463200-37464000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr19:37463200-37464000	Flanking Active TSS	Dnd41	blood
14	chr19:37463200-37464200	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr19:37463200-37464200	Active TSS	Colonic Mucosa	Colon
16	chr19:37463200-37464600	Active TSS	Brain Angular Gyrus	brain
17	chr19:37463200-37464600	Active TSS	Brain Anterior Caudate	brain
18	chr19:37463200-37464600	Active TSS	Brain Cingulate Gyrus	brain
19	chr19:37463200-37464600	Active TSS	Placenta Amnion	Placenta Amnion
20	chr19:37463200-37464600	Active TSS	NHEK	skin
21	chr19:37463200-37464800	Active TSS	Fetal Intestine Small	intestine
22	chr19:37463200-37465000	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr19:37463200-37465000	Flanking Active TSS	Stomach Smooth Muscle	stomach
24	chr19:37463200-37465200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
25	chr19:37463200-37465200	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
26	chr19:37463400-37463600	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
27	chr19:37463400-37463600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
28	chr19:37463400-37463600	Enhancers	Primary B cells from cord blood	blood
29	chr19:37463400-37463600	Enhancers	Primary T cells fromperipheralblood	blood
30	chr19:37463400-37463600	Active TSS	Primary hematopoietic stem cells	blood
31	chr19:37463400-37463600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
32	chr19:37463400-37463600	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
33	chr19:37463400-37463600	Active TSS	Primary T regulatory cells fromperipheralblood	blood
34	chr19:37463400-37463600	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr19:37463400-37463600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr19:37463400-37463600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
37	chr19:37463400-37463600	Flanking Active TSS	Brain Substantia Nigra	brain
38	chr19:37463400-37463600	Flanking Active TSS	Fetal Brain Male	brain
39	chr19:37463400-37463600	Enhancers	Right Ventricle	heart
40	chr19:37463400-37463600	Enhancers	Stomach Mucosa	stomach
41	chr19:37463400-37463600	Flanking Active TSS	Thymus	Thymus
42	chr19:37463400-37463600	Enhancers	HMEC	breast
43	chr19:37463400-37463800	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
44	chr19:37463400-37463800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr19:37463400-37463800	Enhancers	Primary B cells from peripheral blood	blood
46	chr19:37463400-37463800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
47	chr19:37463400-37463800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
48	chr19:37463400-37463800	Flanking Active TSS	Brain Germinal Matrix	brain
49	chr19:37463400-37463800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
50	chr19:37463400-37463800	Flanking Active TSS	Colon Smooth Muscle	Colon

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links