Variant report

Variant	esv3373735
Chromosome Location	chr15:75073424-75076272
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:701)
CpG islands
(count:612)
Chromatin interactive
region (count:49)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:701 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:75074243-75074402	HepG2	liver:	n/a	n/a
2	ATF2	chr15:75073164-75073738	GM12878	blood:	n/a	n/a
3	ATF2	chr15:75072823-75073781	GM12878	blood:	n/a	n/a
4	BACH1	chr15:75073785-75074517	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr15:75075119-75075236	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr15:75073324-75073582	GM12878	blood:	n/a	n/a
7	BCLAF1	chr15:75075419-75076207	GM12878	blood:	n/a	chr15:75075431-75075444
8	BCLAF1	chr15:75073060-75073998	GM12878	blood:	n/a	n/a
9	BCLAF1	chr15:75072965-75074853	GM12878	blood:	n/a	chr15:75074511-75074524 chr15:75074495-75074504 chr15:75074499-75074512 chr15:75074507-75074520 chr15:75074593-75074606 chr15:75074498-75074507 chr15:75074495-75074508 chr15:75074594-75074607 chr15:75074496-75074509 chr15:75074493-75074506
10	BHLHE40	chr15:75073265-75073746	HepG2	liver:	n/a	n/a
11	BHLHE40	chr15:75073313-75073606	K562	blood:	n/a	n/a
12	BHLHE40	chr15:75074155-75074331	K562	blood:	n/a	n/a
13	BHLHE40	chr15:75073187-75074456	GM12878	blood:	n/a	n/a
14	BHLHE40	chr15:75075349-75075395	K562	blood:	n/a	n/a
15	BHLHE40	chr15:75075682-75076274	GM12878	blood:	n/a	n/a
16	BHLHE40	chr15:75075790-75076211	K562	blood:	n/a	n/a
17	BHLHE40	chr15:75074993-75075016	GM12878	blood:	n/a	n/a
18	BHLHE40	chr15:75075805-75076189	HepG2	liver:	n/a	n/a
19	CCNT2	chr15:75074149-75074807	K562	blood:	n/a	n/a
20	CEBPB	chr15:75073076-75074206	GM12878	blood:	n/a	n/a
21	CEBPB	chr15:75074255-75074455	Hela-S3	cervix:	n/a	n/a
22	CEBPB	chr15:75073302-75073626	HepG2	liver:	n/a	n/a
23	CEBPB	chr15:75073332-75073621	GM12878	blood:	n/a	n/a
24	CEBPD	chr15:75074244-75074680	HepG2	liver:	n/a	n/a
25	CHD1	chr15:75072626-75075303	GM12878	blood:	n/a	chr15:75074975-75074985
26	CHD1	chr15:75075555-75076006	GM12878	blood:	n/a	n/a
27	CHD2	chr15:75074900-75075051	Hela-S3	cervix:	n/a	chr15:75074975-75074985
28	CHD2	chr15:75074108-75074500	Hela-S3	cervix:	n/a	n/a
29	CHD2	chr15:75074113-75074333	HepG2	liver:	n/a	n/a
30	CHD2	chr15:75073128-75073490	GM12878	blood:	n/a	n/a
31	CHD2	chr15:75074113-75074358	K562	blood:	n/a	n/a
32	CHD2	chr15:75073731-75074421	GM12878	blood:	n/a	n/a
33	CHD2	chr15:75075851-75076134	GM12878	blood:	n/a	n/a
34	CREB1	chr15:75074110-75074803	A549	lung:	n/a	n/a
35	CTCF	chr15:75074040-75074190	HFF-Myc	foreskin:	n/a	n/a
36	CTCF	chr15:75074191-75074468	Gliobla	brain:	n/a	n/a
37	CTCF	chr15:75073820-75073970	HEK293	kidney:	n/a	n/a
38	CTCF	chr15:75074240-75074390	HCT-116	colon:	n/a	n/a
39	CTCF	chr15:75074200-75074350	Caco-2	colon:	n/a	n/a
40	CTCF	chr15:75074200-75074350	HepG2	liver:	n/a	n/a
41	CTCF	chr15:75074200-75074350	HPAF	blood vessel:	n/a	n/a
42	CTCF	chr15:75074040-75074190	A549	lung:	n/a	n/a
43	CTCF	chr15:75074200-75074350	HMEC	breast:	n/a	n/a
44	CTCF	chr15:75074150-75074517	A549	lung:	n/a	n/a
45	CTCF	chr15:75074220-75074370	AG09319	gingival:	n/a	n/a
46	CTCF	chr15:75076080-75076230	HBMEC	blood vessel:	n/a	n/a
47	CTCF	chr15:75074220-75074370	GM12873	blood:	n/a	n/a
48	CTCF	chr15:75074200-75074350	AG09309	skin:	n/a	n/a
49	CTCF	chr15:75074200-75074350	HPF	lung:	n/a	n/a
50	CTCF	chr15:75074200-75074350	HUVEC	blood vessel:	n/a	n/a

(count:612 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:75075998-75076048	GM12878	blood:	n/a
2	chr15:75076251-75076301	HCPEpiC	choroid plexus:	n/a
3	chr15:75075998-75076048	GM12878	blood:	n/a
4	chr15:75076251-75076301	HCPEpiC	choroid plexus:	n/a
5	chr15:75076251-75076301	AG04449	skin:	fetal
6	chr15:75076251-75076301	GM19239	blood:	n/a
7	chr15:75075998-75076048	GM06990	blood:	n/a
8	chr15:75074012-75074062	HIPEpiC	eye:	n/a
9	chr15:75074068-75074118	HMEC	breast:	n/a
10	chr15:75074012-75074062	NT2-D1	testis:	n/a
11	chr15:75074299-75074349	K562	blood:	n/a
12	chr15:75073839-75073889	HAEpiC	amniotic membrane:	n/a
13	chr15:75074012-75074062	NH-A	brain:	n/a
14	chr15:75074433-75074483	GM19239	blood:	n/a
15	chr15:75074433-75074483	AG09309	skin:	n/a
16	chr15:75074012-75074062	CMK	blood:	n/a
17	chr15:75075998-75076048	HIPEpiC	eye:	n/a
18	chr15:75074068-75074118	MCF-7	breast:	n/a
19	chr15:75074012-75074062	HepG2	liver:	n/a
20	chr15:75076251-75076301	H1-hESC	embryonic stem cell:	embryo
21	chr15:75074433-75074483	GM12891	blood:	n/a
22	chr15:75074433-75074483	AG09319	gingival:	n/a
23	chr15:75075998-75076048	ovcar-3	ovarian:	n/a
24	chr15:75074018-75074068	GM19239	blood:	n/a
25	chr15:75074299-75074349	GM19239	blood:	n/a
26	chr15:75074305-75074355	HNPCEpiC	eye:	n/a
27	chr15:75075998-75076048	SAEC	small airway:	n/a
28	chr15:75073839-75073889	K562	blood:	n/a
29	chr15:75076251-75076301	AG09309	skin:	n/a
30	chr15:75074305-75074355	AoSMC	blood vessel:	n/a
31	chr15:75074068-75074118	HRE	kidney:	n/a
32	chr15:75074433-75074483	ProgFib	skin:	n/a
33	chr15:75074018-75074068	HCF	heart:	n/a
34	chr15:75076251-75076301	SK-N-SH_RA	brain:	n/a
35	chr15:75076251-75076301	T-47D	breast:	n/a
36	chr15:75075998-75076048	K562	blood:	n/a
37	chr15:75074433-75074483	HRPEpiC	eye:	n/a
38	chr15:75074068-75074118	NHDF-neo	bronchial:	n/a
39	chr15:75074018-75074068	NH-A	brain:	n/a
40	chr15:75074305-75074355	GM12892	blood:	n/a
41	chr15:75074012-75074062	AoSMC	blood vessel:	n/a
42	chr15:75074271-75074321	HMEC	breast:	n/a
43	chr15:75073839-75073889	SK-N-MC	brain:	n/a
44	chr15:75075998-75076048	HEK293	kidney:	embryo
45	chr15:75073839-75073889	PrEC	prostate:	n/a
46	chr15:75074299-75074349	NT2-D1	testis:	n/a
47	chr15:75074012-75074062	AG09309	skin:	n/a
48	chr15:75074299-75074349	HRPEpiC	eye:	n/a
49	chr15:75074433-75074483	LNCaP	prostate:	n/a
50	chr15:75074433-75074483	PrEC	prostate:	n/a

(count:49 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:75071239..75073598-chr15:75247193..75248970,3	K562	blood:
2	chr15:75075890..75077943-chr15:75083927..75085940,3	K562	blood:
3	chr15:75072228..75074857-chr15:75134119..75137193,5	K562	blood:
4	chr15:75074321..75074842-chr17:78120823..78121661,2	Hela-S3	cervix:
5	chr15:75073774..75074799-chr15:75092256..75093185,7	MCF-7	breast:
6	chr15:75072350..75078841-chr15:75107920..75114107,12	MCF-7	breast:
7	chr15:75072261..75077453-chr15:75091040..75094267,5	K562	blood:
8	chr15:75074806..75076876-chr15:75192504..75194161,2	K562	blood:
9	chr15:75071180..75073699-chr15:75308688..75311602,2	MCF-7	breast:
10	chr15:74915721..74919302-chr15:75074662..75077539,3	MCF-7	breast:
11	chr15:75073922..75074422-chr21:42742045..42742898,2	NB4	blood:
12	chr15:75074174..75075858-chr15:75112738..75114767,2	MCF-7	breast:
13	chr15:75074156..75079604-chr15:75107384..75112501,9	MCF-7	breast:
14	chr15:74927915..74930465-chr15:75075287..75077377,2	MCF-7	breast:
15	chr15:75075306..75077471-chr15:75113085..75115871,2	K562	blood:
16	chr15:75072788..75075776-chr15:75181274..75184204,3	K562	blood:
17	chr15:75074533..75077400-chr15:75247038..75249331,2	MCF-7	breast:
18	chr15:75072788..75075776-chr15:75181274..75184204,2	K562	blood:
19	chr15:75074461..75076806-chr15:75112062..75114585,2	K562	blood:
20	chr15:75073852..75074625-chr15:75135150..75135967,3	MCF-7	breast:
21	chr15:74927868..74930219-chr15:75074349..75076958,3	MCF-7	breast:
22	chr15:75075073..75076597-chr15:75243005..75244574,2	MCF-7	breast:
23	chr15:75071971..75073821-chr15:75084189..75086951,2	K562	blood:
24	chr15:75073924..75075938-chr17:37855960..37858891,2	MCF-7	breast:
25	chr15:75072694..75075672-chr15:75228478..75230738,4	K562	blood:
26	chr15:75073435..75075467-chr15:75197436..75200109,2	K562	blood:
27	chr15:75073996..75074536-chr20:46292269..46292964,2	MCF-7	breast:
28	chr15:75074243..75074749-chr15:75092589..75093143,2	K562	blood:
29	chr15:75074126..75076948-chr15:75116903..75120530,4	MCF-7	breast:
30	chr15:75073376..75079113-chr15:75130007..75137097,15	MCF-7	breast:
31	chr15:75074194..75076388-chr15:75195576..75199734,3	MCF-7	breast:
32	chr15:75043196..75045391-chr15:75075402..75077625,2	K562	blood:
33	chr15:75073135..75075746-chr15:75163972..75165852,2	K562	blood:
34	chr15:75072694..75075868-chr15:75228655..75230932,4	K562	blood:
35	chr15:75063124..75064142-chr15:75073395..75074345,3	K562	blood:
36	chr15:75074533..75077222-chr15:75090764..75094129,5	MCF-7	breast:
37	chr15:75072623..75074857-chr15:75134348..75137142,2	K562	blood:
38	chr15:75069513..75071369-chr15:75076004..75078063,2	K562	blood:
39	chr15:75071239..75073598-chr15:75247367..75248970,2	K562	blood:
40	chr15:75073526..75075460-chr15:75228949..75230471,2	MCF-7	breast:
41	chr15:75074322..75074886-chr15:75092284..75093191,2	MCF-7	breast:
42	chr15:74908350..74910118-chr15:75071323..75073781,2	MCF-7	breast:
43	chr15:75072740..75076753-chr15:75116483..75119304,4	MCF-7	breast:
44	chr15:75072512..75079183-chr15:75180576..75186728,11	MCF-7	breast:
45	chr15:75073739..75076026-chr15:75228940..75231737,2	MCF-7	breast:
46	chr15:75072881..75075069-chr15:75249092..75251017,2	K562	blood:
47	chr15:75073819..75074794-chr15:75091819..75093280,12	MCF-7	breast:
48	chr15:75065380..75067175-chr15:75075106..75076815,2	K562	blood:
49	chr15:75073170..75080511-chr15:75126432..75130376,7	MCF-7	breast:

No data

Variant related genes	Relation type
CSK	TF binding region
CSK	CpG island
ENSG00000103653	chromatin interactions
ENSG00000198794	chromatin interactions
ENSG00000178802	chromatin interactions
ENSG00000196562	chromatin interactions
ENSG00000141543	chromatin interactions
ENSG00000178718	chromatin interactions
ENSG00000140497	chromatin interactions
ENSG00000183486	chromatin interactions
ENSG00000141736	chromatin interactions
ENSG00000178741	chromatin interactions
ENSG00000179151	chromatin interactions
ENSG00000178761	chromatin interactions
ENSG00000140474	chromatin interactions
ENSG00000140506	chromatin interactions
ENSG00000179335	chromatin interactions
ENSG00000213578	chromatin interactions
ENSG00000261606	chromatin interactions

Extended variants
information (count: 62 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:62 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs139529999	chr15:75073428-75073429	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
2	rs141856776	chr15:75073499-75073500	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
3	rs569464450	chr15:75073534-75073535	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
4	rs539980687	chr15:75073557-75073558	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
5	rs375595324	chr15:75073608-75073609	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
6	rs558073444	chr15:75073695-75073696	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
7	rs566954968	chr15:75073742-75073743	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
8	rs35765049	chr15:75073910-75073911	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
9	rs534070576	chr15:75073926-75073927	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
10	rs532790695	chr15:75073935-75073936	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
11	rs76289907	chr15:75074011-75074012	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
12	rs573726549	chr15:75074013-75074014	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
13	rs34755093	chr15:75074204-75074205	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	15 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs546209368	chr15:75074239-75074240	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
15	rs566363259	chr15:75074241-75074242	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
16	rs566409279	chr15:75074261-75074262	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
17	rs201211427	chr15:75074314-75074315	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
18	rs35182824	chr15:75074320-75074321	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
19	rs7496625	chr15:75074342-75074343	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
20	rs575452209	chr15:75074354-75074355	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
21	rs183551129	chr15:75074382-75074383	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
22	rs564167254	chr15:75074473-75074474	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
23	rs528173704	chr15:75074508-75074509	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
24	rs186442904	chr15:75074527-75074528	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
25	rs35608422	chr15:75074759-75074760	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
26	rs34718487	chr15:75074836-75074837	Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
27	rs528857610	chr15:75074840-75074841	Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
28	rs35484217	chr15:75074871-75074872	Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
29	rs569489653	chr15:75074872-75074873	Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
30	rs533503457	chr15:75074885-75074886	Active TSS Bivalent/Poised TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
31	rs551944811	chr15:75075011-75075012	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
32	rs374414117	chr15:75075263-75075264	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
33	rs191275959	chr15:75075270-75075271	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
34	rs534008226	chr15:75075319-75075320	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
35	rs150636028	chr15:75075322-75075323	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
36	rs535545518	chr15:75075359-75075360	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
37	rs537808635	chr15:75075405-75075406	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
38	rs556329571	chr15:75075464-75075465	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
39	rs575484924	chr15:75075498-75075499	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
40	rs144848513	chr15:75075499-75075500	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
41	rs35116476	chr15:75075505-75075506	Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
42	rs545812944	chr15:75075635-75075636	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
43	rs12439944	chr15:75075650-75075651	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	13 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs11854982	chr15:75075653-75075654	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
45	rs76411014	chr15:75075655-75075656	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
46	rs375952150	chr15:75075663-75075664	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
47	rs540440725	chr15:75075673-75075674	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
48	rs139830069	chr15:75075678-75075679	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
49	rs34398824	chr15:75075712-75075713	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
50	rs140161971	chr15:75075762-75075763	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Prostate cancer	16573809	CNVD
Autism	17322880	CNVD
phobic disorder	16773131	CNVD
Autism	21480499	CNVD
Disorders of sex development	22290220	CNVD
Mental retardation	19951919	CNVD
Mental retardation	16773131	CNVD
T-cell lymphomas	19863542	CNVD
15q24 microdeletion syndrome	22180641	CNVD
15q24 microdeletion syndrome	19921647	CNVD
Disease	22216833	CNVD
Mental retardation	17360722	CNVD
15q24 microdeletion syndrome	22216833	CNVD
15q24 microdeletion syndrome	22283845	CNVD
Developmental delay	17932688	CNVD
craniofacial dysmorphism	17932688	CNVD
digital and genital abnormalities	17932688	CNVD
Breast cancer	21364760	CNVD
Epilepsy	22083797	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Myelofibrosis	22110671	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:503 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:75065600-75073600	Enhancers	Fetal Intestine Large	intestine
2	chr15:75065600-75073600	Enhancers	Fetal Intestine Small	intestine
3	chr15:75067400-75074200	Enhancers	Stomach Mucosa	stomach
4	chr15:75069600-75073800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr15:75070000-75073800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr15:75070200-75073600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr15:75071600-75074200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
8	chr15:75072200-75073600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr15:75072200-75073600	Enhancers	Placenta	Placenta
10	chr15:75072200-75074000	Flanking Active TSS	Primary T cells from cord blood	blood
11	chr15:75072200-75074200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr15:75072200-75074200	Flanking Active TSS	GM12878-XiMat	blood
13	chr15:75072200-75074200	Flanking Active TSS	HepG2	liver
14	chr15:75072200-75074200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
15	chr15:75072400-75073600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr15:75072400-75073600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr15:75072400-75073600	Enhancers	NHLF	lung
18	chr15:75072400-75074000	Enhancers	Placenta Amnion	Placenta Amnion
19	chr15:75072400-75074200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
20	chr15:75072400-75074200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
21	chr15:75072400-75074200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
22	chr15:75072400-75074200	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
23	chr15:75072400-75074200	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
24	chr15:75072400-75074200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
25	chr15:75072400-75074200	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
26	chr15:75072400-75074200	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
27	chr15:75072400-75074200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
28	chr15:75072400-75074400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr15:75072600-75073600	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
30	chr15:75072600-75073600	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
31	chr15:75072600-75073600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr15:75072600-75073800	Enhancers	Fetal Stomach	stomach
33	chr15:75072600-75074000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr15:75072600-75074000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
35	chr15:75072600-75074200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
36	chr15:75072600-75074200	Flanking Active TSS	Duodenum Mucosa	Duodenum
37	chr15:75072600-75074400	Flanking Active TSS	Liver	Liver
38	chr15:75072600-75074400	Flanking Active TSS	Colonic Mucosa	Colon
39	chr15:75072600-75074400	Flanking Active TSS	Fetal Thymus	thymus
40	chr15:75072800-75073600	Enhancers	Adipose Nuclei	Adipose
41	chr15:75072800-75073600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
42	chr15:75072800-75073600	Enhancers	Skeletal Muscle Male	skeletal muscle
43	chr15:75072800-75073600	Weak transcription	A549	lung
44	chr15:75072800-75073800	Enhancers	NHDF-Ad	bronchial
45	chr15:75072800-75074200	Flanking Active TSS	Primary B cells from cord blood	blood
46	chr15:75072800-75074200	Flanking Active TSS	Primary B cells from peripheral blood	blood
47	chr15:75072800-75074200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
48	chr15:75072800-75074200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
49	chr15:75072800-75074200	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr15:75072800-75074200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin

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