Variant report

Variant nsv1010104
Chromosome Location chr4:78520674-78553754
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:160 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:78521200-78523600 Enhancers Liver Liver
2 chr4:78521400-78522400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr4:78521600-78522400 Enhancers Primary T helper cells PMA-I stimulated --
4 chr4:78522200-78523600 Enhancers HMEC breast
5 chr4:78522400-78523000 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr4:78522400-78523400 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr4:78522400-78523800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr4:78522600-78523600 Enhancers NHEK skin
9 chr4:78522600-78523800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr4:78522800-78523600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr4:78523600-78526200 Weak transcription Liver Liver
12 chr4:78523800-78524400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr4:78524400-78524600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:78526000-78526200 Enhancers Brain Germinal Matrix brain
15 chr4:78526200-78526800 Enhancers Liver Liver
16 chr4:78526400-78527200 Enhancers HepG2 liver
17 chr4:78526400-78527600 Weak transcription Brain Germinal Matrix brain
18 chr4:78527600-78527800 Enhancers Fetal Lung lung
19 chr4:78527600-78528400 Enhancers Brain Germinal Matrix brain
20 chr4:78528000-78530800 Weak transcription Fetal Lung lung
21 chr4:78529600-78540000 Weak transcription Right Atrium heart
22 chr4:78530800-78532000 Enhancers Fetal Lung lung
23 chr4:78532000-78544000 Weak transcription Fetal Lung lung
24 chr4:78534200-78534400 Enhancers Adipose Nuclei Adipose
25 chr4:78534400-78534600 Bivalent/Poised TSS Osteobl bone
26 chr4:78534400-78534800 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr4:78534400-78534800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr4:78534400-78534800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr4:78534400-78535000 Flanking Active TSS Adipose Nuclei Adipose
30 chr4:78534600-78534800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr4:78534600-78534800 Active TSS Osteobl bone
32 chr4:78534600-78535200 Enhancers Skeletal Muscle Male skeletal muscle
33 chr4:78534800-78535000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr4:78534800-78535000 Flanking Active TSS Osteobl bone
35 chr4:78534800-78535200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr4:78534800-78535200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr4:78535000-78535200 Enhancers Adipose Nuclei Adipose
38 chr4:78535000-78535200 Enhancers Left Ventricle heart
39 chr4:78535000-78535200 Enhancers Osteobl bone
40 chr4:78535200-78539600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr4:78535200-78539800 Weak transcription Left Ventricle heart
42 chr4:78535200-78539800 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr4:78536400-78536800 Active TSS GM12878-XiMat blood
44 chr4:78538400-78538600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr4:78538400-78538600 Enhancers HMEC breast
46 chr4:78538400-78540200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr4:78538600-78539600 Weak transcription HMEC breast
48 chr4:78539600-78540000 Enhancers HUES6 Cell Line embryonic stem cell
49 chr4:78539600-78540000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr4:78539600-78540000 Enhancers Brain Hippocampus Middle brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links