Variant report

Variant	nsv470866
Chromosome Location	chr6:149744632-149806552
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1852)
CpG islands
(count:2199)
Chromatin interactive
region (count:78)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1852 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:149805810-149806816	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:149762478-149762931	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:149761833-149761881	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:149753093-149753436	HepG2	liver:	n/a	n/a
5	ATF2	chr6:149792855-149793395	GM12878	blood:	n/a	n/a
6	ATF2	chr6:149792810-149793813	GM12878	blood:	n/a	n/a
7	ATF2	chr6:149805947-149806460	GM12878	blood:	n/a	n/a
8	ATF2	chr6:149802774-149803763	GM12878	blood:	n/a	n/a
9	ATF2	chr6:149789899-149790409	GM12878	blood:	n/a	n/a
10	ATF2	chr6:149805417-149806918	GM12878	blood:	n/a	n/a
11	ATF2	chr6:149789927-149790416	GM12878	blood:	n/a	n/a
12	ATF2	chr6:149753021-149753565	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr6:149802895-149803670	GM12878	blood:	n/a	n/a
14	ATF2	chr6:149794137-149794625	GM12878	blood:	n/a	n/a
15	ATF2	chr6:149794115-149794595	GM12878	blood:	n/a	n/a
16	ATF2	chr6:149753036-149753475	GM12878	blood:	n/a	n/a
17	ATF3	chr6:149777942-149778134	K562	blood:	n/a	n/a
18	ATF3	chr6:149766740-149766941	K562	blood:	n/a	n/a
19	BACH1	chr6:149771870-149772280	H1-hESC	embryonic stem cell:	n/a	n/a
20	BATF	chr6:149792884-149793330	GM12878	blood:	n/a	n/a
21	BATF	chr6:149760096-149760455	GM12878	blood:	n/a	n/a
22	BATF	chr6:149805894-149806464	GM12878	blood:	n/a	n/a
23	BATF	chr6:149792984-149793324	GM12878	blood:	n/a	n/a
24	BATF	chr6:149789990-149790354	GM12878	blood:	n/a	n/a
25	BATF	chr6:149759878-149760455	GM12878	blood:	n/a	n/a
26	BCL11A	chr6:149760019-149760454	GM12878	blood:	n/a	n/a
27	BCL11A	chr6:149765256-149765749	GM12878	blood:	n/a	n/a
28	BCL11A	chr6:149803282-149803590	GM12878	blood:	n/a	chr6:149803419-149803432 chr6:149803530-149803539
29	BCL11A	chr6:149789963-149790382	GM12878	blood:	n/a	n/a
30	BCL11A	chr6:149804438-149804679	GM12878	blood:	n/a	n/a
31	BCL11A	chr6:149805927-149806376	GM12878	blood:	n/a	chr6:149806120-149806129 chr6:149806231-149806240
32	BCL11A	chr6:149792911-149793305	GM12878	blood:	n/a	n/a
33	BCL11A	chr6:149792950-149793283	GM12878	blood:	n/a	n/a
34	BCL3	chr6:149792891-149793836	GM12878	blood:	n/a	n/a
35	BCL3	chr6:149794083-149794603	GM12878	blood:	n/a	n/a
36	BCL3	chr6:149765589-149766196	GM12878	blood:	n/a	n/a
37	BCL3	chr6:149789909-149790414	GM12878	blood:	n/a	n/a
38	BCL3	chr6:149761942-149762469	GM12878	blood:	n/a	n/a
39	BCL3	chr6:149765027-149765359	GM12878	blood:	n/a	n/a
40	BCL3	chr6:149803109-149803623	GM12878	blood:	n/a	chr6:149803419-149803432 chr6:149803530-149803539
41	BCL3	chr6:149778683-149778929	GM12878	blood:	n/a	n/a
42	BCL3	chr6:149764924-149765402	GM12878	blood:	n/a	n/a
43	BCL3	chr6:149762178-149762410	GM12878	blood:	n/a	n/a
44	BCL3	chr6:149765582-149766061	GM12878	blood:	n/a	n/a
45	BCLAF1	chr6:149759965-149760388	GM12878	blood:	n/a	n/a
46	BCLAF1	chr6:149753042-149753521	GM12878	blood:	n/a	n/a
47	BCLAF1	chr6:149805776-149806379	GM12878	blood:	n/a	chr6:149806120-149806129 chr6:149806231-149806240
48	BCLAF1	chr6:149789706-149790418	GM12878	blood:	n/a	n/a
49	BCLAF1	chr6:149792820-149793613	GM12878	blood:	n/a	n/a
50	BCLAF1	chr6:149806418-149806944	GM12878	blood:	n/a	n/a

(count:2199 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:149803426-149803476	AG04449	skin:	fetal
2	chr6:149751329-149751379	PFSK-1	brain:	n/a
3	chr6:149772707-149772757	A549	lung:	n/a
4	chr6:149803426-149803476	AG04449	skin:	fetal
5	chr6:149751329-149751379	PFSK-1	brain:	n/a
6	chr6:149772707-149772757	A549	lung:	n/a
7	chr6:149772892-149772942	NHDF-neo	bronchial:	n/a
8	chr6:149806273-149806323	AG09309	skin:	n/a
9	chr6:149806077-149806127	HAEpiC	amniotic membrane:	n/a
10	chr6:149772150-149772200	HL-60	blood:	n/a
11	chr6:149806273-149806323	ProgFib	skin:	n/a
12	chr6:149806077-149806127	K562	blood:	n/a
13	chr6:149777984-149778034	NHDF-neo	bronchial:	n/a
14	chr6:149806131-149806181	K562	blood:	n/a
15	chr6:149781248-149781298	HEEpiC	esophagus:	n/a
16	chr6:149803426-149803476	HEEpiC	esophagus:	n/a
17	chr6:149803111-149803161	BE2_C	brain:	n/a
18	chr6:149772150-149772200	NB4	blood:	n/a
19	chr6:149751225-149751275	SK-N-MC	brain:	n/a
20	chr6:149771845-149771895	BJ	skin:	n/a
21	chr6:149806131-149806181	AG04450	lung:	fetal
22	chr6:149778775-149778825	NB4	blood:	n/a
23	chr6:149806339-149806389	HCPEpiC	choroid plexus:	n/a
24	chr6:149803426-149803476	K562	blood:	n/a
25	chr6:149785754-149785804	HRPEpiC	eye:	n/a
26	chr6:149775853-149775903	AG09309	skin:	n/a
27	chr6:149806081-149806131	HMEC	breast:	n/a
28	chr6:149775853-149775903	HepG2	liver:	n/a
29	chr6:149771845-149771895	SAEC	small airway:	n/a
30	chr6:149778775-149778825	HepG2	liver:	n/a
31	chr6:149785754-149785804	AG04450	lung:	fetal
32	chr6:149806081-149806131	HEEpiC	esophagus:	n/a
33	chr6:149781248-149781298	IMR90	lung:	fetal
34	chr6:149772346-149772396	NH-A	brain:	n/a
35	chr6:149772716-149772766	HMEC	breast:	n/a
36	chr6:149805995-149806045	T-47D	breast:	n/a
37	chr6:149751225-149751275	IMR90	lung:	fetal
38	chr6:149806273-149806323	Hepatocyte	liver:	n/a
39	chr6:149806235-149806285	K562	blood:	n/a
40	chr6:149751329-149751379	HCF	heart:	n/a
41	chr6:149772716-149772766	HAEpiC	amniotic membrane:	n/a
42	chr6:149771807-149771857	PFSK-1	brain:	n/a
43	chr6:149771807-149771857	AG09309	skin:	n/a
44	chr6:149806077-149806127	A549	lung:	n/a
45	chr6:149772346-149772396	AG04450	lung:	fetal
46	chr6:149806273-149806323	HEEpiC	esophagus:	n/a
47	chr6:149806331-149806381	BJ	skin:	n/a
48	chr6:149806081-149806131	K562	blood:	n/a
49	chr6:149806077-149806127	BE2_C	brain:	n/a
50	chr6:149803426-149803476	H1-hESC	embryonic stem cell:	embryo

(count:78 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:149703892..149707802-chr6:149748749..149751962,4	MCF-7	breast:
2	chr6:149404330..149406131-chr6:149751650..149753242,2	MCF-7	breast:
3	chr6:149379361..149382289-chr6:149745014..149748004,4	MCF-7	breast:
4	chr6:149801342..149802873-chr6:149804387..149807166,3	MCF-7	breast:
5	chr6:149517097..149517616-chr6:149753109..149753764,2	K562	blood:
6	chr6:149750637..149752761-chr6:149774465..149776310,2	MCF-7	breast:
7	chr6:149352319..149353862-chr6:149749427..149751302,2	MCF-7	breast:
8	chr6:149736139..149738247-chr6:149750968..149753957,2	K562	blood:
9	chr6:149763379..149766103-chr6:149776553..149779366,2	MCF-7	breast:
10	chr6:149785728..149788361-chr6:149790642..149793612,2	K562	blood:
11	chr6:149792520..149794344-chr6:149794518..149797030,2	K562	blood:
12	chr6:149749032..149751401-chr6:149754918..149757804,2	K562	blood:
13	chr6:149348466..149350718-chr6:149745093..149747617,2	MCF-7	breast:
14	chr6:149764839..149766396-chr6:149774052..149775951,2	MCF-7	breast:
15	chr6:149349740..149350625-chr6:149750799..149751756,3	K562	blood:
16	chr6:149798641..149801260-chr6:149810434..149812141,2	K562	blood:
17	chr6:149748430..149751387-chr6:149751741..149754089,3	MCF-7	breast:
18	chr6:149380842..149383187-chr6:149749461..149751628,2	MCF-7	breast:
19	chr6:149381576..149384224-chr6:149749932..149753109,3	MCF-7	breast:
20	chr6:149742080..149743974-chr6:149748766..149751309,2	MCF-7	breast:
21	chr6:149745176..149748304-chr6:149748732..149751749,4	MCF-7	breast:
22	chr6:149401238..149401748-chr6:149748753..149749409,2	MCF-7	breast:
23	chr6:149757368..149759713-chr6:149765073..149766703,2	K562	blood:
24	chr6:149403286..149404899-chr6:149752639..149753736,6	MCF-7	breast:
25	chr6:149511094..149511659-chr6:149753092..149753721,3	MCF-7	breast:
26	chr6:149349695..149350816-chr6:149752428..149753382,4	K562	blood:
27	chr6:149748841..149750725-chr6:149751621..149753759,2	K562	blood:
28	chr6:149762143..149764363-chr6:149765543..149768268,2	K562	blood:
29	chr6:149795286..149796796-chr6:149799603..149801991,2	MCF-7	breast:
30	chr6:149347837..149348431-chr6:149752868..149753657,2	MCF-7	breast:
31	chr6:149795137..149796969-chr6:149800706..149802832,2	K562	blood:
32	chr6:149399709..149402380-chr6:149772394..149774498,2	K562	blood:
33	chr6:149762143..149764363-chr6:149765543..149768268,2	K562	blood:
34	chr6:149401238..149401990-chr6:149748324..149749629,5	MCF-7	breast:
35	chr6:149378979..149381253-chr6:149751036..149753374,2	K562	blood:
36	chr6:149785728..149788361-chr6:149790642..149793612,2	K562	blood:
37	chr6:149352390..149354385-chr6:149752598..149755216,2	MCF-7	breast:
38	chr6:149779659..149781916-chr6:149782862..149785427,2	K562	blood:
39	chr6:149744819..149747181-chr6:149748180..149751163,2	MCF-7	breast:
40	chr6:149750637..149752761-chr6:149774465..149776310,2	MCF-7	breast:
41	chr6:149749032..149751401-chr6:149754918..149757804,2	K562	blood:
42	chr6:149637666..149639444-chr6:149793847..149796038,2	K562	blood:
43	chr6:149407753..149410844-chr6:149747576..149751159,3	MCF-7	breast:
44	chr6:149351119..149355583-chr6:149748923..149756337,13	MCF-7	breast:
45	chr6:149749225..149751406-chr6:149752259..149754784,2	K562	blood:
46	chr6:149398184..149404330-chr6:149748783..149757211,17	MCF-7	breast:
47	chr6:149740980..149743677-chr6:149744800..149747765,2	K562	blood:
48	chr6:149763319..149765484-chr6:149839894..149842239,2	MCF-7	breast:
49	chr6:149403053..149404232-chr6:149752839..149753842,8	K562	blood:
50	chr6:149792520..149794344-chr6:149794518..149797030,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZC3H12D-9	chr6:149768794-149769181	NONHSAT115500
2	lnc-ZC3H12D-9	chr6:149769570-149770516	NONHSAT115500

No data

Variant related genes	Relation type
ZC3H12D	TF binding region
ZC3H12D	CpG island
ENSG00000236591	chromatin interactions
ENSG00000178199	chromatin interactions
ENSG00000055208	chromatin interactions

Extended variants
information (count: 2538 )
Associated
traits (count: 86 )

Variant overlapped rSNPs/rCNVs (count:2538 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12207047	chr6:149744632-149744633	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs552281703	chr6:149744663-149744664	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
3	rs200611525	chr6:149744721-149744722	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs551519410	chr6:149744727-149744728	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs113899381	chr6:149744758-149744759	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs56771079	chr6:149744769-149744770	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs34662322	chr6:149744770-149744771	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs35590785	chr6:149744771-149744772	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs71010867	chr6:149744772-149744773	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs571693471	chr6:149744800-149744801	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs545124256	chr6:149744811-149744812	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs138670615	chr6:149744822-149744823	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs567473655	chr6:149744823-149744824	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs536469310	chr6:149744825-149744826	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs12207261	chr6:149744858-149744859	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs237016	chr6:149744859-149744860	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs544965306	chr6:149744864-149744865	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs139847487	chr6:149744891-149744892	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs183008836	chr6:149744912-149744913	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs527273073	chr6:149744921-149744922	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs652514	chr6:149744924-149744925	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs560971146	chr6:149744925-149744926	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs118011253	chr6:149744959-149744960	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs543657957	chr6:149744989-149744990	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs150704882	chr6:149745056-149745057	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs532332888	chr6:149745121-149745122	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs551741994	chr6:149745225-149745226	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs565091751	chr6:149745230-149745231	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs139962066	chr6:149745243-149745244	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs373894363	chr6:149745273-149745274	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs548723083	chr6:149745283-149745284	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs186810033	chr6:149745323-149745324	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs567435056	chr6:149745444-149745445	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs573655941	chr6:149745459-149745460	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs35963593	chr6:149745464-149745465	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs149833941	chr6:149745561-149745562	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs237015	chr6:149745566-149745567	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs570323598	chr6:149745594-149745595	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs539006328	chr6:149745655-149745656	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs71700736	chr6:149745659-149745660	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs397702938	chr6:149745667-149745668	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs5880837	chr6:149745668-149745669	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs191749768	chr6:149745671-149745672	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs3056064	chr6:149745700-149745701	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs71748234	chr6:149745701-149745702	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs142303212	chr6:149745702-149745703	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs58610070	chr6:149745715-149745716	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs5880838	chr6:149745724-149745725	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs373861697	chr6:149745725-149745726	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs571903399	chr6:149745727-149745728	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:86)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Malignant melanoma	17260012	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Soft tissue tumor	16732325	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
Cancer	17160897	CNVD
Breast cancer	17417639	CNVD
Breast cancer	17850661	CNVD
Renal cell carcinoma	18765545	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Ovarian neoplasms	16753589	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20556506	CNVD
Hirschsprung''s Disease	21712996	CNVD
Testicular germ cell tumor	18059402	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1979 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:149709600-149750200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:149721800-149744800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:149721800-149745200	Weak transcription	Pancreas	Pancrea
4	chr6:149722000-149745000	Weak transcription	Colon Smooth Muscle	Colon
5	chr6:149731600-149745200	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr6:149731600-149745200	Weak transcription	Left Ventricle	heart
7	chr6:149731600-149745200	Weak transcription	Rectal Smooth Muscle	rectum
8	chr6:149731800-149745200	Weak transcription	Fetal Brain Female	brain
9	chr6:149732200-149745000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr6:149732400-149745200	Weak transcription	Brain Germinal Matrix	brain
11	chr6:149732600-149744800	Weak transcription	NH-A	brain
12	chr6:149732600-149745400	Weak transcription	Dnd41	blood
13	chr6:149732800-149744800	Weak transcription	HUES48 Cell Line	embryonic stem cell
14	chr6:149733200-149744800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr6:149733400-149744800	Weak transcription	HUES6 Cell Line	embryonic stem cell
16	chr6:149733600-149744800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr6:149735600-149744800	Weak transcription	Adipose Nuclei	Adipose
18	chr6:149739800-149744800	Weak transcription	Fetal Muscle Leg	muscle
19	chr6:149742000-149745000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
20	chr6:149744000-149745600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr6:149744000-149746800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr6:149744200-149744800	Bivalent Enhancer	HepG2	liver
23	chr6:149744200-149745600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr6:149744400-149745000	Enhancers	Liver	Liver
25	chr6:149744400-149745200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr6:149744400-149745200	Active TSS	Brain Anterior Caudate	brain
27	chr6:149744400-149745200	Active TSS	Brain Inferior Temporal Lobe	brain
28	chr6:149744400-149745200	Weak transcription	Placenta	Placenta
29	chr6:149744400-149745200	Weak transcription	Lung	lung
30	chr6:149744400-149745400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr6:149744400-149745400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr6:149744400-149745400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr6:149744400-149745400	Enhancers	Muscle Satellite Cultured Cells	--
34	chr6:149744400-149745400	Enhancers	HSMMtube	muscle
35	chr6:149744400-149745400	Flanking Active TSS	Osteobl	bone
36	chr6:149744400-149745600	Enhancers	Cortex derived primary cultured neurospheres	brain
37	chr6:149744400-149745600	Enhancers	Ovary	ovary
38	chr6:149744600-149744800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr6:149744600-149744800	Active TSS	Brain Substantia Nigra	brain
40	chr6:149744600-149744800	Enhancers	Fetal Lung	lung
41	chr6:149744600-149745000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr6:149744600-149745000	Active TSS	Duodenum Smooth Muscle	Duodenum
43	chr6:149744600-149745000	Enhancers	NHLF	lung
44	chr6:149744600-149745200	Active TSS	Brain Angular Gyrus	brain
45	chr6:149744600-149745200	Active TSS	Brain Cingulate Gyrus	brain
46	chr6:149744600-149745200	Active TSS	Brain Hippocampus Middle	brain
47	chr6:149744600-149745200	Weak transcription	Duodenum Mucosa	Duodenum
48	chr6:149744600-149745200	Enhancers	Fetal Intestine Small	intestine
49	chr6:149744600-149745200	Flanking Active TSS	NHDF-Ad	bronchial
50	chr6:149744600-149745400	Active TSS	Aorta	Aorta

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