Variant report

Variant	nsv527073
Chromosome Location	chr11:8829168-8848463
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:596)
CpG islands
(count:916)
Chromatin interactive
region (count:26)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:596 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:8847689-8848415	K562	blood:	n/a	n/a
2	ATF1	chr11:8835699-8836199	K562	blood:	n/a	n/a
3	ATF1	chr11:8847948-8848405	K562	blood:	n/a	n/a
4	ATF2	chr11:8847555-8848137	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr11:8831752-8832395	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr11:8831655-8832480	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF3	chr11:8847982-8848338	K562	blood:	n/a	n/a
8	BACH1	chr11:8831988-8832339	H1-hESC	embryonic stem cell:	n/a	n/a
9	BCLAF1	chr11:8835148-8835490	GM12878	blood:	n/a	n/a
10	BHLHE40	chr11:8832237-8832280	GM12878	blood:	n/a	n/a
11	BHLHE40	chr11:8835141-8835508	K562	blood:	n/a	n/a
12	BHLHE40	chr11:8847725-8847996	K562	blood:	n/a	n/a
13	BHLHE40	chr11:8835775-8836105	K562	blood:	n/a	n/a
14	CCNT2	chr11:8848017-8848445	K562	blood:	n/a	n/a
15	CEBPB	chr11:8829157-8829512	IMR90	lung:	n/a	n/a
16	CEBPB	chr11:8831863-8832261	Hela-S3	cervix:	n/a	n/a
17	CEBPB	chr11:8833117-8833520	IMR90	lung:	n/a	n/a
18	CEBPB	chr11:8833990-8834356	HepG2	liver:	n/a	n/a
19	CEBPB	chr11:8834035-8834375	MCF-7	breast:	n/a	n/a
20	CEBPB	chr11:8834036-8834325	A549	lung:	n/a	n/a
21	CEBPB	chr11:8835762-8836287	Hela-S3	cervix:	n/a	n/a
22	CEBPB	chr11:8836035-8836211	HepG2	liver:	n/a	n/a
23	CEBPB	chr11:8835243-8835592	HepG2	liver:	n/a	n/a
24	CEBPB	chr11:8835218-8835696	IMR90	lung:	n/a	n/a
25	CEBPB	chr11:8834135-8834303	Hela-S3	cervix:	n/a	n/a
26	CHD2	chr11:8835257-8835449	K562	blood:	n/a	n/a
27	CHD2	chr11:8831942-8832444	H1-hESC	embryonic stem cell:	n/a	n/a
28	CHD2	chr11:8832095-8832133	HepG2	liver:	n/a	n/a
29	CHD2	chr11:8832027-8832338	Hela-S3	cervix:	n/a	n/a
30	CHD2	chr11:8835184-8835453	HepG2	liver:	n/a	n/a
31	CHD2	chr11:8835171-8835474	Hela-S3	cervix:	n/a	n/a
32	CHD2	chr11:8835174-8835501	H1-hESC	embryonic stem cell:	n/a	n/a
33	CTCF	chr11:8835076-8835464	H1-hESC	embryonic stem cell:	n/a	chr11:8835303-8835321 chr11:8835298-8835319 chr11:8835304-8835320 chr11:8835309-8835318 chr11:8835305-8835318
34	CTCF	chr11:8832300-8832590	AG10803	skin:	n/a	n/a
35	CTCF	chr11:8832360-8832510	HCPEpiC	choroid plexus:	n/a	n/a
36	CTCF	chr11:8832188-8832246	LNCaP	prostate:	n/a	n/a
37	CTCF	chr11:8835240-8835390	HBMEC	blood vessel:	n/a	chr11:8835303-8835321 chr11:8835298-8835319 chr11:8835304-8835320 chr11:8835309-8835318 chr11:8835305-8835318
38	CTCF	chr11:8834840-8834990	NHLF	lung:	n/a	n/a
39	CTCF	chr11:8835260-8835410	MCF-7	breast:	n/a	chr11:8835303-8835321 chr11:8835298-8835319 chr11:8835304-8835320 chr11:8835309-8835318 chr11:8835305-8835318
40	CTCF	chr11:8835203-8835455	MCF-7	breast:	n/a	chr11:8835303-8835321 chr11:8835298-8835319 chr11:8835304-8835320 chr11:8835309-8835318 chr11:8835305-8835318
41	CTCF	chr11:8834716-8835688	SK-N-SH	brain:	n/a	chr11:8835303-8835321 chr11:8835298-8835319 chr11:8835304-8835320 chr11:8835309-8835318 chr11:8835305-8835318
42	CTCF	chr11:8835240-8835390	AG04449	skin:	n/a	chr11:8835303-8835321 chr11:8835298-8835319 chr11:8835304-8835320 chr11:8835309-8835318 chr11:8835305-8835318
43	CTCF	chr11:8835240-8835390	GM12873	blood:	n/a	chr11:8835303-8835321 chr11:8835298-8835319 chr11:8835304-8835320 chr11:8835309-8835318 chr11:8835305-8835318
44	CTCF	chr11:8829260-8829410	AG04449	skin:	n/a	n/a
45	CTCF	chr11:8834120-8834270	A549	lung:	n/a	n/a
46	CTCF	chr11:8835185-8835453	MCF-7	breast:	n/a	chr11:8835303-8835321 chr11:8835298-8835319 chr11:8835304-8835320 chr11:8835309-8835318 chr11:8835305-8835318
47	CTCF	chr11:8832200-8832350	SAEC	small airway:	n/a	n/a
48	CTCF	chr11:8832200-8832350	BJ	skin:	n/a	n/a
49	CTCF	chr11:8835260-8835410	BE2_C	brain:	n/a	chr11:8835303-8835321 chr11:8835298-8835319 chr11:8835304-8835320 chr11:8835309-8835318 chr11:8835305-8835318
50	CTCF	chr11:8834840-8834990	Hela-S3	cervix:	n/a	n/a

(count:916 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:8832956-8833006	SKMC	muscle:	n/a
2	chr11:8832956-8833006	SKMC	muscle:	n/a
3	chr11:8832956-8833006	Jurkat	blood:	n/a
4	chr11:8832283-8832333	AG10803	skin:	n/a
5	chr11:8832938-8832988	SK-N-SH	brain:	n/a
6	chr11:8833689-8833739	LNCaP	prostate:	n/a
7	chr11:8829438-8829488	SK-N-SH_RA	brain:	n/a
8	chr11:8832272-8832322	PANC-1	pancreas:	n/a
9	chr11:8832111-8832161	AG04450	lung:	fetal
10	chr11:8833095-8833145	K562	blood:	n/a
11	chr11:8832938-8832988	PANC-1	pancreas:	n/a
12	chr11:8836048-8836098	Hepatocyte	liver:	n/a
13	chr11:8832111-8832161	AG10803	skin:	n/a
14	chr11:8832817-8832867	NH-A	brain:	n/a
15	chr11:8833902-8833952	GM12878	blood:	n/a
16	chr11:8832817-8832867	GM19239	blood:	n/a
17	chr11:8833689-8833739	HUVEC	blood vessel:	n/a
18	chr11:8847662-8847712	HCM	heart:	n/a
19	chr11:8847662-8847712	GM12892	blood:	n/a
20	chr11:8836048-8836098	AG04450	lung:	fetal
21	chr11:8847662-8847712	Hela-S3	cervix:	n/a
22	chr11:8832272-8832322	Caco-2	colon:	n/a
23	chr11:8829438-8829488	AG04450	lung:	fetal
24	chr11:8832111-8832161	HUVEC	blood vessel:	n/a
25	chr11:8832938-8832988	IMR90	lung:	fetal
26	chr11:8832907-8832957	SAEC	small airway:	n/a
27	chr11:8832817-8832867	HCPEpiC	choroid plexus:	n/a
28	chr11:8832203-8832253	ECC-1	luminal epithelium:	n/a
29	chr11:8833095-8833145	Jurkat	blood:	n/a
30	chr11:8832907-8832957	A549	lung:	n/a
31	chr11:8832111-8832161	MCF-7	breast:	n/a
32	chr11:8832283-8832333	NHDF-neo	bronchial:	n/a
33	chr11:8836048-8836098	HL-60	blood:	n/a
34	chr11:8832272-8832322	U87	brain:	n/a
35	chr11:8832111-8832161	Caco-2	colon:	n/a
36	chr11:8829438-8829488	NH-A	brain:	n/a
37	chr11:8832956-8833006	HPAEpiC	pulmonary alveolar:	n/a
38	chr11:8836048-8836098	HRE	kidney:	n/a
39	chr11:8832938-8832988	PFSK-1	brain:	n/a
40	chr11:8847662-8847712	BJ	skin:	n/a
41	chr11:8832283-8832333	GM12892	blood:	n/a
42	chr11:8836048-8836098	HCPEpiC	choroid plexus:	n/a
43	chr11:8836048-8836098	PrEC	prostate:	n/a
44	chr11:8829438-8829488	ovcar-3	ovarian:	n/a
45	chr11:8832283-8832333	ProgFib	skin:	n/a
46	chr11:8832283-8832333	PrEC	prostate:	n/a
47	chr11:8833095-8833145	PrEC	prostate:	n/a
48	chr11:8829438-8829488	HCM	heart:	n/a
49	chr11:8832817-8832867	HIPEpiC	eye:	n/a
50	chr11:8833902-8833952	LNCaP	prostate:	n/a

(count:26 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:8709021..8711860-chr11:8841578..8843870,2	K562	blood:
2	chr11:8708349..8711473-chr11:8829326..8831114,3	K562	blood:
3	chr11:8835559..8836309-chr6:74226294..74227037,2	Hela-S3	cervix:
4	chr11:8708066..8711768-chr11:8837087..8840258,4	MCF-7	breast:
5	chr11:8707539..8711325-chr11:8831652..8835543,5	MCF-7	breast:
6	chr11:8285056..8285937-chr11:8834836..8835396,2	K562	blood:
7	chr11:8847275..8850671-chr11:8853327..8856938,3	K562	blood:
8	chr11:8840012..8842971-chr11:8854220..8856402,2	MCF-7	breast:
9	chr11:8708284..8710316-chr11:8838549..8840292,2	MCF-7	breast:
10	chr11:8701773..8703653-chr11:8846645..8848951,2	MCF-7	breast:
11	chr11:8709004..8710990-chr11:8840827..8843152,2	MCF-7	breast:
12	chr11:8847441..8849119-chr11:9018204..9019722,2	K562	blood:
13	chr11:8835358..8837463-chr11:8838521..8841389,2	MCF-7	breast:
14	chr11:8717868..8722426-chr11:8832973..8835335,4	K562	blood:
15	chr11:8708964..8711177-chr11:8835969..8837619,2	MCF-7	breast:
16	chr11:8706888..8711251-chr11:8829326..8831400,3	K562	blood:
17	chr11:8835358..8837463-chr11:8838521..8841389,2	MCF-7	breast:
18	chr11:8707625..8713219-chr11:8836057..8840145,5	K562	blood:
19	chr11:8707625..8711209-chr11:8836057..8839950,3	K562	blood:
20	chr11:8836156..8836984-chr11:60928785..60929437,2	Hela-S3	cervix:
21	chr11:8702560..8704162-chr11:8846609..8848145,2	MCF-7	breast:
22	chr11:8711214..8713494-chr11:8834662..8837467,3	K562	blood:
23	chr11:8702847..8705692-chr11:8833365..8835740,2	MCF-7	breast:
24	chr11:8830703..8833043-chr11:8833134..8835525,2	MCF-7	breast:
25	chr11:8831391..8833809-chr11:8833845..8836255,2	K562	blood:
26	chr11:8827149..8829298-chr11:8831731..8833459,2	MCF-7	breast:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RPL27A-2	chr11:8831624-8831776	ENSG00000255159.1
2	lnc-TRIM66-7	chr11:8829373-8832882	NONHSAT017885
3	lnc-TRIM66-7	chr11:8832964-8833127	NONHSAT017885
4	lnc-TRIM66-7	chr11:8832830-8832878	NONHSAT017886
5	lnc-RPL27A-2	chr11:8831624-8831778	ENSG00000255159.1

No data

Variant related genes	Relation type
ST5	TF binding region
ST5	CpG island
ENSG00000167987	chromatin interactions
ENSG00000166441	chromatin interactions
ENSG00000212607	chromatin interactions
ENSG00000166407	chromatin interactions
ENSG00000166444	chromatin interactions

Extended variants
information (count: 747 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:747 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2292049	chr11:8829168-8829169	Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs187228533	chr11:8829193-8829194	Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs535574875	chr11:8829197-8829198	Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs375573136	chr11:8829243-8829244	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs549483098	chr11:8829295-8829296	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs60014692	chr11:8829297-8829298	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs569140684	chr11:8829342-8829343	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs538252242	chr11:8829350-8829351	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs11042079	chr11:8829416-8829417	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
10	rs4929917	chr11:8829463-8829464	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs539600294	chr11:8829467-8829468	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
12	rs10840129	chr11:8829494-8829495	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
13	rs145332663	chr11:8829513-8829514	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
14	rs573024270	chr11:8829530-8829531	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
15	rs541546716	chr11:8829584-8829585	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
16	rs80121449	chr11:8829602-8829603	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
17	rs558832757	chr11:8829687-8829688	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
18	rs543809691	chr11:8829704-8829705	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
19	rs147647938	chr11:8829713-8829714	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
20	rs533436983	chr11:8829714-8829715	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
21	rs546935661	chr11:8829718-8829719	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
22	rs113335490	chr11:8829719-8829720	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
23	rs529526006	chr11:8829748-8829749	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
24	rs549173684	chr11:8829791-8829792	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
25	rs569354924	chr11:8829794-8829795	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
26	rs537802056	chr11:8829809-8829810	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
27	rs182279483	chr11:8829842-8829843	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
28	rs571707121	chr11:8829847-8829848	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
29	rs539725871	chr11:8829861-8829862	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
30	rs377224805	chr11:8829911-8829912	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
31	rs566632790	chr11:8829914-8829915	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
32	rs535662402	chr11:8829941-8829942	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
33	rs375192438	chr11:8829957-8829958	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
34	rs3850934	chr11:8829967-8829968	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs543944161	chr11:8830099-8830100	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
36	rs557328293	chr11:8830112-8830113	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
37	rs577246184	chr11:8830133-8830134	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
38	rs571400337	chr11:8830138-8830139	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
39	rs185418514	chr11:8830145-8830146	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
40	rs534321208	chr11:8830180-8830181	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
41	rs190172079	chr11:8830192-8830193	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
42	rs140899386	chr11:8830196-8830197	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
43	rs543207403	chr11:8830236-8830237	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
44	rs150163811	chr11:8830283-8830284	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
45	rs183057572	chr11:8830334-8830335	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
46	rs551948079	chr11:8830361-8830362	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
47	rs571655662	chr11:8830379-8830380	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
48	rs116128144	chr11:8830384-8830385	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
49	rs78115344	chr11:8830385-8830386	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
50	rs369896924	chr11:8830412-8830413	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Neuroblastoma	18923191	CNVD
Breast cancer	19432969	CNVD
Alzheimer''s disease	17576883	CNVD
Long-qt syndrome	17576883	CNVD
Emphysema	19352772	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Chordoma	18071362	CNVD
Breast cancer	16608533	CNVD
Cancer	21183584	CNVD
Gastric adenocarcinoma	19115996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Myelofibrosis	22110671	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Neuroblastoma	21124317	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Schizophrenia	21399695	CNVD
Gastric cancer	16891809	CNVD
Cancer	17160897	CNVD
Multiple myeloma	16616336	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Dysmorphic features	22052655	CNVD
Intellectual disability	22052655	CNVD
Obesity	22052655	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21785460	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:958 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8809000-8830200	Weak transcription	Fetal Brain Male	brain
2	chr11:8809200-8829200	Weak transcription	Fetal Kidney	kidney
3	chr11:8811800-8830400	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr11:8811800-8830600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr11:8816400-8831800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr11:8816600-8830000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr11:8816600-8830600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr11:8819800-8829800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr11:8821600-8830200	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr11:8824200-8830400	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr11:8825200-8829400	Enhancers	Right Ventricle	heart
12	chr11:8825400-8829400	Enhancers	Brain Cingulate Gyrus	brain
13	chr11:8825400-8829400	Enhancers	Brain Inferior Temporal Lobe	brain
14	chr11:8825400-8830400	Enhancers	Left Ventricle	heart
15	chr11:8825600-8829600	Enhancers	Gastric	stomach
16	chr11:8826400-8829800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr11:8826400-8830600	Enhancers	Brain Angular Gyrus	brain
18	chr11:8826600-8830200	Enhancers	Pancreas	Pancrea
19	chr11:8827200-8829200	Flanking Active TSS	Stomach Smooth Muscle	stomach
20	chr11:8827400-8830400	Enhancers	Psoas Muscle	Psoas
21	chr11:8827400-8831200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr11:8827600-8830600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr11:8827600-8831000	Enhancers	HUES6 Cell Line	embryonic stem cell
24	chr11:8827800-8829200	Enhancers	Fetal Muscle Leg	muscle
25	chr11:8827800-8829400	Enhancers	Fetal Heart	heart
26	chr11:8827800-8829800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr11:8827800-8830200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr11:8827800-8830800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
29	chr11:8828000-8830000	Enhancers	Esophagus	oesophagus
30	chr11:8828000-8830800	Enhancers	Brain Germinal Matrix	brain
31	chr11:8828200-8829200	Flanking Active TSS	HSMM	muscle
32	chr11:8828200-8829600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
33	chr11:8828200-8829600	Flanking Active TSS	Rectal Smooth Muscle	rectum
34	chr11:8828200-8830200	Flanking Active TSS	Colon Smooth Muscle	Colon
35	chr11:8828200-8830200	Weak transcription	Pancreatic Islets	Pancreatic Islet
36	chr11:8828200-8830400	Enhancers	Cortex derived primary cultured neurospheres	brain
37	chr11:8828200-8831000	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr11:8828400-8829200	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
39	chr11:8828400-8829400	Enhancers	Placenta	Placenta
40	chr11:8828400-8829800	Flanking Active TSS	Colonic Mucosa	Colon
41	chr11:8828400-8830000	Enhancers	Lung	lung
42	chr11:8828400-8830400	Genic enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr11:8828400-8831000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr11:8828600-8829200	Flanking Active TSS	Ovary	ovary
45	chr11:8828600-8829200	Enhancers	Small Intestine	intestine
46	chr11:8828600-8829600	Flanking Active TSS	Fetal Muscle Trunk	muscle
47	chr11:8828600-8830000	Enhancers	Fetal Intestine Large	intestine
48	chr11:8828600-8830000	Enhancers	Sigmoid Colon	Sigmoid Colon
49	chr11:8828600-8830600	Enhancers	Fetal Intestine Small	intestine
50	chr11:8828600-8830800	Transcr. at gene 5' and 3'	Fetal Stomach	stomach

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