Variant report

Variant	nsv823771
Chromosome Location	chr6:88032762-88039447
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:104)
CpG islands
(count:183)
Chromatin interactive
region (count:8)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:104 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr6:88032623-88032824	K562	blood:	n/a	n/a
2	CBX3	chr6:88031914-88032937	K562	blood:	n/a	n/a
3	CEBPB	chr6:88038751-88038949	Hela-S3	cervix:	n/a	n/a
4	CHD2	chr6:88038816-88038832	H1-hESC	embryonic stem cell:	n/a	n/a
5	CHD2	chr6:88038824-88038952	Hela-S3	cervix:	n/a	n/a
6	CTCF	chr6:88038227-88038257	H1-hESC	embryonic stem cell:	n/a	n/a
7	CTCF	chr6:88032640-88032790	HAc	cerebellar:	n/a	n/a
8	CTCF	chr6:88032755-88032844	K562	blood:	n/a	n/a
9	CTCF	chr6:88038160-88038310	HEK293	kidney:	n/a	n/a
10	CTCF	chr6:88031453-88033043	SK-N-SH	brain:	n/a	n/a
11	EGR1	chr6:88038553-88038763	K562	blood:	n/a	n/a
12	EP300	chr6:88032079-88032797	K562	blood:	n/a	n/a
13	FOXA2	chr6:88038367-88038712	A549	lung:	n/a	n/a
14	FOXA2	chr6:88038204-88038811	A549	lung:	n/a	n/a
15	HA-E2F1	chr6:88032005-88032790	MCF-7	breast:	n/a	n/a
16	HA-E2F1	chr6:88038516-88038921	MCF-7	breast:	n/a	n/a
17	HCFC1	chr6:88031821-88032828	Hela-S3	cervix:	n/a	n/a
18	IRF1	chr6:88032055-88032858	K562	blood:	n/a	n/a
19	JUND	chr6:88032059-88032764	K562	blood:	n/a	n/a
20	KAP1	chr6:88031791-88032859	HEK293	kidney:	n/a	n/a
21	KAP1	chr6:88038534-88039171	HEK293	kidney:	n/a	n/a
22	MAX	chr6:88032076-88032778	ECC-1	luminal epithelium:	n/a	n/a
23	MAX	chr6:88032060-88032916	Hela-S3	cervix:	n/a	n/a
24	MAX	chr6:88032001-88032911	MCF-7	breast:	n/a	n/a
25	MAX	chr6:88031968-88032860	NB4	blood:	n/a	n/a
26	MAX	chr6:88032539-88032987	K562	blood:	n/a	n/a
27	MAZ	chr6:88032040-88032931	K562	blood:	n/a	n/a
28	MEF2A	chr6:88032091-88032777	GM12878	blood:	n/a	n/a
29	MTA3	chr6:88031830-88032897	GM12878	blood:	n/a	n/a
30	MXI1	chr6:88032145-88032763	GM12878	blood:	n/a	n/a
31	MYC	chr6:88032071-88032877	K562	blood:	n/a	n/a
32	MYC	chr6:88038538-88038884	MCF-7	breast:	n/a	n/a
33	MYC	chr6:88032054-88032791	K562	blood:	n/a	n/a
34	MYC	chr6:88031958-88032929	NB4	blood:	n/a	n/a
35	MYC	chr6:88038737-88038798	MCF-7	breast:	n/a	n/a
36	MYC	chr6:88038582-88038671	MCF-7	breast:	n/a	n/a
37	NR2F2	chr6:88032043-88032770	MCF-7	breast:	n/a	n/a
38	PML	chr6:88032094-88032853	K562	blood:	n/a	n/a
39	POLR2A	chr6:88033517-88033614	K562	blood:	n/a	n/a
40	POLR2A	chr6:88038438-88038718	MCF-7	breast:	n/a	n/a
41	POLR2A	chr6:88032092-88032881	K562	blood:	n/a	n/a
42	POLR2A	chr6:88031790-88032962	PFSK-1	brain:	n/a	n/a
43	POLR2A	chr6:88032043-88032872	GM12878	blood:	n/a	n/a
44	POLR2A	chr6:88038686-88038711	MCF-7	breast:	n/a	n/a
45	POLR2A	chr6:88031989-88032836	GM12891	blood:	n/a	n/a
46	POLR2A	chr6:88031989-88032770	HL-60	blood:	n/a	n/a
47	POLR2A	chr6:88038716-88039070	MCF-7	breast:	n/a	n/a
48	POLR2A	chr6:88039077-88039088	MCF-7	breast:	n/a	n/a
49	POLR2A	chr6:88032008-88032778	HepG2	liver:	n/a	n/a
50	POLR2A	chr6:88032031-88032926	MCF-7	breast:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:88039031-88039081	LNCaP	prostate:	n/a
2	chr6:88039031-88039081	A549	lung:	n/a
3	chr6:88032718-88032768	Caco-2	colon:	n/a
4	chr6:88039023-88039073	AG04449	skin:	fetal
5	chr6:88032718-88032768	HCPEpiC	choroid plexus:	n/a
6	chr6:88039023-88039073	HCF	heart:	n/a
7	chr6:88039031-88039081	SK-N-SH_RA	brain:	n/a
8	chr6:88032718-88032768	SAEC	small airway:	n/a
9	chr6:88039031-88039081	NHBE	bronchial:	n/a
10	chr6:88039023-88039073	HUVEC	blood vessel:	n/a
11	chr6:88032718-88032768	AG10803	skin:	n/a
12	chr6:88039023-88039073	CMK	blood:	n/a
13	chr6:88032718-88032768	SK-N-SH_RA	brain:	n/a
14	chr6:88039023-88039073	AG10803	skin:	n/a
15	chr6:88032718-88032768	AG09309	skin:	n/a
16	chr6:88039031-88039081	ovcar-3	ovarian:	n/a
17	chr6:88039023-88039073	HCM	heart:	n/a
18	chr6:88039023-88039073	HRCEpiC	kidney:	n/a
19	chr6:88039023-88039073	IMR90	lung:	fetal
20	chr6:88032718-88032768	SK-N-MC	brain:	n/a
21	chr6:88032718-88032768	HMEC	breast:	n/a
22	chr6:88032718-88032768	NHDF-neo	bronchial:	n/a
23	chr6:88039023-88039073	ovcar-3	ovarian:	n/a
24	chr6:88039023-88039073	T-47D	breast:	n/a
25	chr6:88039023-88039073	HMEC	breast:	n/a
26	chr6:88039023-88039073	GM19239	blood:	n/a
27	chr6:88032718-88032768	U87	brain:	n/a
28	chr6:88039031-88039081	HCT-116	colon:	n/a
29	chr6:88032718-88032768	Hela-S3	cervix:	n/a
30	chr6:88032718-88032768	AG04449	skin:	fetal
31	chr6:88039023-88039073	PrEC	prostate:	n/a
32	chr6:88039023-88039073	ProgFib	skin:	n/a
33	chr6:88039023-88039073	SK-N-SH_RA	brain:	n/a
34	chr6:88032718-88032768	GM06990	blood:	n/a
35	chr6:88039031-88039081	NT2-D1	testis:	n/a
36	chr6:88039031-88039081	HEEpiC	esophagus:	n/a
37	chr6:88039023-88039073	GM12892	blood:	n/a
38	chr6:88039023-88039073	HEK293	kidney:	embryo
39	chr6:88032718-88032768	SK-N-SH	brain:	n/a
40	chr6:88039031-88039081	ProgFib	skin:	n/a
41	chr6:88039023-88039073	NB4	blood:	n/a
42	chr6:88032718-88032768	GM12892	blood:	n/a
43	chr6:88039031-88039081	HCPEpiC	choroid plexus:	n/a
44	chr6:88039023-88039073	MCF10A-Er-Src	breast:	n/a
45	chr6:88039023-88039073	PANC-1	pancreas:	n/a
46	chr6:88039031-88039081	ECC-1	luminal epithelium:	n/a
47	chr6:88039031-88039081	HRE	kidney:	n/a
48	chr6:88032718-88032768	RPTEC	kidney:	n/a
49	chr6:88039031-88039081	H1-hESC	embryonic stem cell:	embryo
50	chr6:88039031-88039081	HAEpiC	amniotic membrane:	n/a

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:88031398..88035229-chr6:88037396..88042297,5	MCF-7	breast:
2	chr6:88032389..88034079-chr6:88038245..88041213,2	K562	blood:
3	chr6:88031398..88035229-chr6:88037396..88042297,5	MCF-7	breast:
4	chr6:88030655..88033234-chr6:88038071..88039593,2	MCF-7	breast:
5	chr3:52231539..52232367-chr6:88032218..88032782,2	NB4	blood:
6	chr6:88030655..88033234-chr6:88038071..88039593,2	MCF-7	breast:
7	chr6:88032389..88034079-chr6:88038245..88041213,2	K562	blood:
8	chr6:87864467..87866478-chr6:88032306..88034676,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RARS2-5	chr6:88038856-88038959	NONHSAT113898

No data

Variant related genes	Relation type
GJB7	TF binding region
GJB7	CpG island
ENSG00000023330	chromatin interactions
ENSG00000188994	chromatin interactions
ENSG00000226524	chromatin interactions
ENSG00000272008	chromatin interactions
ENSG00000164411	chromatin interactions
ENSG00000111850	chromatin interactions

Extended variants
information (count: 374 )
Associated
traits (count: 105 )

Variant overlapped rSNPs/rCNVs (count:374 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs562425748	chr6:88032763-88032764	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
2	rs574277292	chr6:88032787-88032788	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs1753152	chr6:88032788-88032789	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs369800467	chr6:88032827-88032828	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs386703507	chr6:88032834-88032835	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs1753154	chr6:88032843-88032844	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
7	rs60226642	chr6:88032852-88032853	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs182673207	chr6:88032854-88032855	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs140304693	chr6:88032867-88032868	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs187522218	chr6:88032869-88032870	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs117266537	chr6:88032871-88032872	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs202067190	chr6:88032887-88032888	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs190471537	chr6:88032909-88032910	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs569280339	chr6:88032922-88032923	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs183946249	chr6:88032956-88032957	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs149864305	chr6:88032985-88032986	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs373293352	chr6:88032988-88032989	Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs76201598	chr6:88033000-88033001	Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs200940145	chr6:88033005-88033006	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs557453923	chr6:88033014-88033015	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs534276977	chr6:88033028-88033029	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs188940066	chr6:88033036-88033037	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs193053393	chr6:88033040-88033041	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs184606930	chr6:88033049-88033050	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs577708687	chr6:88033056-88033057	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs567769543	chr6:88033057-88033058	Active TSS Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs186616940	chr6:88033081-88033082	Active TSS Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs544569531	chr6:88033082-88033083	Active TSS Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs191862177	chr6:88033098-88033099	Active TSS Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs370958051	chr6:88033129-88033130	Active TSS Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs527430679	chr6:88033164-88033165	Active TSS Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs542697529	chr6:88033168-88033169	Active TSS Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs113728339	chr6:88033213-88033214	Weak transcription Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs12194354	chr6:88033240-88033241	Weak transcription Active TSS Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
35	rs550111895	chr6:88033269-88033270	Weak transcription Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs542381581	chr6:88033278-88033279	Weak transcription Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs183842288	chr6:88033288-88033289	Weak transcription Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs201760531	chr6:88033290-88033291	Weak transcription Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs566840943	chr6:88033326-88033327	Weak transcription Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs534070250	chr6:88033327-88033328	Weak transcription Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs559247129	chr6:88033350-88033351	Weak transcription Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs112069647	chr6:88033406-88033407	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs567522634	chr6:88033445-88033446	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs58345266	chr6:88033521-88033522	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs556452624	chr6:88033522-88033523	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs577887800	chr6:88033582-88033583	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs74553481	chr6:88033588-88033589	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs201827586	chr6:88033600-88033601	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs62441406	chr6:88033603-88033604	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs189005523	chr6:88033633-88033634	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:105)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Cancer	20164920	CNVD
Burkitt''s lymphoma	20823134	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
abnormal development	18461090	CNVD
Myelodysplastic syndrome	18508791	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	21364760	CNVD
Developmental delay	19490664	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD

Chromatin state (count:226 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:88031400-88032800	Active TSS	Liver	Liver
2	chr6:88031600-88032800	Active TSS	Brain Substantia Nigra	brain
3	chr6:88031600-88033000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr6:88031600-88033000	Active TSS	Brain Inferior Temporal Lobe	brain
5	chr6:88031600-88033000	Active TSS	Duodenum Smooth Muscle	Duodenum
6	chr6:88031600-88033000	Active TSS	Psoas Muscle	Psoas
7	chr6:88031600-88033000	Active TSS	GM12878-XiMat	blood
8	chr6:88031600-88033200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr6:88031600-88033200	Active TSS	Brain Anterior Caudate	brain
10	chr6:88031600-88033200	Active TSS	Colonic Mucosa	Colon
11	chr6:88031600-88033200	Active TSS	Fetal Brain Female	brain
12	chr6:88031600-88033200	Active TSS	Fetal Muscle Trunk	muscle
13	chr6:88031800-88032800	Active TSS	Primary T cells from cord blood	blood
14	chr6:88031800-88032800	Bivalent/Poised TSS	Brain Germinal Matrix	brain
15	chr6:88031800-88033000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr6:88031800-88033000	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
17	chr6:88031800-88033000	Active TSS	Primary T helper naive cells from peripheral blood	blood
18	chr6:88031800-88033000	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
19	chr6:88031800-88033000	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr6:88031800-88033000	Active TSS	Cortex derived primary cultured neurospheres	brain
21	chr6:88031800-88033000	Active TSS	Aorta	Aorta
22	chr6:88031800-88033000	Active TSS	Colon Smooth Muscle	Colon
23	chr6:88031800-88033000	Active TSS	Fetal Intestine Large	intestine
24	chr6:88031800-88033000	Active TSS	Fetal Intestine Small	intestine
25	chr6:88031800-88033000	Active TSS	Ovary	ovary
26	chr6:88031800-88033000	Active TSS	Stomach Mucosa	stomach
27	chr6:88031800-88033000	Active TSS	NHDF-Ad	bronchial
28	chr6:88031800-88033000	Active TSS	NHLF	lung
29	chr6:88031800-88033200	Active TSS	ES-I3 Cell Line	embryonic stem cell
30	chr6:88031800-88033200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr6:88031800-88033200	Active TSS	HUES48 Cell Line	embryonic stem cell
32	chr6:88031800-88033200	Active TSS	HUES64 Cell Line	embryonic stem cell
33	chr6:88031800-88033200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr6:88031800-88033200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr6:88031800-88033200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
36	chr6:88031800-88033200	Active TSS	Brain Cingulate Gyrus	brain
37	chr6:88031800-88033200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
38	chr6:88031800-88033200	Active TSS	Fetal Kidney	kidney
39	chr6:88031800-88033200	Active TSS	Pancreatic Islets	Pancreatic Islet
40	chr6:88031800-88033200	Active TSS	Fetal Lung	lung
41	chr6:88031800-88033200	Active TSS	Right Atrium	heart
42	chr6:88031800-88033200	Active TSS	Right Ventricle	heart
43	chr6:88031800-88033200	Active TSS	HSMM	muscle
44	chr6:88031800-88033400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr6:88032000-88032800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr6:88032000-88032800	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr6:88032000-88032800	Active TSS	Gastric	stomach
48	chr6:88032000-88032800	Active TSS	Placenta Amnion	Placenta Amnion
49	chr6:88032000-88033000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr6:88032000-88033000	Active TSS	Primary T killer memory cells from peripheral blood	blood

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