Variant report

Variant	nsv897644
Chromosome Location	chr11:63754986-63849330
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2219)
CpG islands
(count:3909)
Chromatin interactive
region (count:179)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:2219 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:63775279-63775620	K562	blood:	n/a	n/a
2	ARID3A	chr11:63775280-63775601	HepG2	liver:	n/a	n/a
3	ATF1	chr11:63775311-63775619	K562	blood:	n/a	n/a
4	ATF2	chr11:63767064-63767328	GM12878	blood:	n/a	n/a
5	ATF2	chr11:63765834-63766357	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr11:63792675-63792990	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr11:63766903-63767235	GM12878	blood:	n/a	n/a
8	ATF3	chr11:63770902-63771103	K562	blood:	n/a	chr11:63771039-63771053
9	ATF3	chr11:63841753-63841975	K562	blood:	n/a	n/a
10	ATF3	chr11:63772005-63772436	K562	blood:	n/a	n/a
11	BACH1	chr11:63774825-63775008	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr11:63775343-63775555	K562	blood:	n/a	n/a
13	BACH1	chr11:63767436-63767607	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr11:63775210-63775560	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr11:63791417-63791759	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr11:63766437-63767186	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr11:63802876-63802981	H1-hESC	embryonic stem cell:	n/a	n/a
18	BCL3	chr11:63774489-63775789	A549	lung:	n/a	n/a
19	BCL3	chr11:63774182-63775698	A549	lung:	n/a	chr11:63774220-63774233
20	BCL3	chr11:63768826-63769206	A549	lung:	n/a	n/a
21	BCL3	chr11:63764721-63765243	K562	blood:	n/a	n/a
22	BCL3	chr11:63765401-63766255	K562	blood:	n/a	n/a
23	BCLAF1	chr11:63767874-63768219	GM12878	blood:	n/a	chr11:63767947-63767960 chr11:63767943-63767956 chr11:63767949-63767962 chr11:63767950-63767963 chr11:63768128-63768141
24	BCLAF1	chr11:63775214-63775699	K562	blood:	n/a	n/a
25	BHLHE40	chr11:63789157-63789357	HepG2	liver:	n/a	n/a
26	BHLHE40	chr11:63775269-63775558	HepG2	liver:	n/a	chr11:63775436-63775452
27	BHLHE40	chr11:63775075-63775633	HepG2	liver:	n/a	chr11:63775436-63775452
28	BHLHE40	chr11:63775133-63775706	K562	blood:	n/a	chr11:63775436-63775452
29	BHLHE40	chr11:63804009-63804180	K562	blood:	n/a	n/a
30	BHLHE40	chr11:63775246-63775565	A549	lung:	n/a	chr11:63775436-63775452
31	BHLHE40	chr11:63775381-63775479	GM12878	blood:	n/a	chr11:63775436-63775452
32	BHLHE40	chr11:63815684-63815903	HepG2	liver:	n/a	n/a
33	BHLHE40	chr11:63841798-63842043	K562	blood:	n/a	n/a
34	BHLHE40	chr11:63768018-63768154	GM12878	blood:	n/a	chr11:63768053-63768069
35	BHLHE40	chr11:63774514-63774932	K562	blood:	n/a	n/a
36	BHLHE40	chr11:63789158-63789396	K562	blood:	n/a	n/a
37	BRCA1	chr11:63815522-63815611	HepG2	liver:	n/a	n/a
38	BRCA1	chr11:63775214-63775325	HepG2	liver:	n/a	n/a
39	CBX3	chr11:63772036-63772445	K562	blood:	n/a	n/a
40	CBX3	chr11:63807405-63807674	K562	blood:	n/a	n/a
41	CBX3	chr11:63775300-63775534	K562	blood:	n/a	n/a
42	CBX3	chr11:63775189-63775636	K562	blood:	n/a	n/a
43	CCNT2	chr11:63767134-63767334	K562	blood:	n/a	n/a
44	CCNT2	chr11:63775082-63775801	K562	blood:	n/a	chr11:63775179-63775188
45	CCNT2	chr11:63796085-63796179	K562	blood:	n/a	chr11:63796120-63796129 chr11:63796152-63796161
46	CCNT2	chr11:63768203-63768343	K562	blood:	n/a	n/a
47	CCNT2	chr11:63766172-63766838	K562	blood:	n/a	n/a
48	CCNT2	chr11:63828186-63828923	K562	blood:	n/a	chr11:63828358-63828367
49	CEBPB	chr11:63762666-63762798	K562	blood:	n/a	n/a
50	CEBPB	chr11:63847823-63848038	IMR90	lung:	n/a	chr11:63847908-63847919

(count:3909 , 50 per page) page: 1 2 3 4 5 6 7 ... 79

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:63827432-63827482	PANC-1	pancreas:	n/a
2	chr11:63789520-63789570	HUVEC	blood vessel:	n/a
3	chr11:63839479-63839529	Jurkat	blood:	n/a
4	chr11:63776397-63776447	Caco-2	colon:	n/a
5	chr11:63839511-63839561	PANC-1	pancreas:	n/a
6	chr11:63827432-63827482	PANC-1	pancreas:	n/a
7	chr11:63789520-63789570	HUVEC	blood vessel:	n/a
8	chr11:63839479-63839529	Jurkat	blood:	n/a
9	chr11:63776397-63776447	Caco-2	colon:	n/a
10	chr11:63839511-63839561	PANC-1	pancreas:	n/a
11	chr11:63799985-63800035	Hela-S3	cervix:	n/a
12	chr11:63776397-63776447	K562	blood:	n/a
13	chr11:63784126-63784176	HUVEC	blood vessel:	n/a
14	chr11:63803839-63803889	MCF10A-Er-Src	breast:	n/a
15	chr11:63827432-63827482	Hela-S3	cervix:	n/a
16	chr11:63776419-63776469	Hela-S3	cervix:	n/a
17	chr11:63828569-63828619	BE2_C	brain:	n/a
18	chr11:63775894-63775944	AG04449	skin:	fetal
19	chr11:63766546-63766596	HUVEC	blood vessel:	n/a
20	chr11:63766787-63766837	AG10803	skin:	n/a
21	chr11:63767561-63767611	PFSK-1	brain:	n/a
22	chr11:63789520-63789570	HAEpiC	amniotic membrane:	n/a
23	chr11:63775071-63775121	GM12891	blood:	n/a
24	chr11:63796982-63797032	AG04449	skin:	fetal
25	chr11:63808040-63808090	HCPEpiC	choroid plexus:	n/a
26	chr11:63775226-63775276	ProgFib	skin:	n/a
27	chr11:63768032-63768082	Jurkat	blood:	n/a
28	chr11:63799985-63800035	AG04449	skin:	fetal
29	chr11:63839528-63839578	GM12892	blood:	n/a
30	chr11:63804044-63804094	GM12891	blood:	n/a
31	chr11:63827361-63827411	GM06990	blood:	n/a
32	chr11:63764925-63764975	SK-N-SH_RA	brain:	n/a
33	chr11:63804119-63804169	HRPEpiC	eye:	n/a
34	chr11:63783359-63783409	HIPEpiC	eye:	n/a
35	chr11:63828569-63828619	LNCaP	prostate:	n/a
36	chr11:63802973-63803023	PFSK-1	brain:	n/a
37	chr11:63799985-63800035	NH-A	brain:	n/a
38	chr11:63802973-63803023	HepG2	liver:	n/a
39	chr11:63767561-63767611	HPAEpiC	pulmonary alveolar:	n/a
40	chr11:63789520-63789570	NB4	blood:	n/a
41	chr11:63784102-63784152	SK-N-SH_RA	brain:	n/a
42	chr11:63768665-63768715	PrEC	prostate:	n/a
43	chr11:63804481-63804531	HEK293	kidney:	embryo
44	chr11:63775413-63775463	HEEpiC	esophagus:	n/a
45	chr11:63808040-63808090	HRE	kidney:	n/a
46	chr11:63828762-63828812	HEK293	kidney:	embryo
47	chr11:63796198-63796248	LNCaP	prostate:	n/a
48	chr11:63784126-63784176	HMEC	breast:	n/a
49	chr11:63827879-63827929	BE2_C	brain:	n/a
50	chr11:63776653-63776703	AG10803	skin:	n/a

(count:179 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr11:63774815..63776528-chr11:63778908..63781240,2	K562	blood:
2	chr11:63837418..63841150-chr11:63854327..63856960,4	K562	blood:
3	chr11:63579621..63581291-chr11:63753774..63755303,2	MCF-7	breast:
4	chr11:63783940..63785557-chr11:63787876..63789715,2	MCF-7	breast:
5	chr11:63802829..63806325-chr11:63806494..63809212,5	MCF-7	breast:
6	chr11:63787684..63790315-chr11:63796619..63799437,3	MCF-7	breast:
7	chr11:63790185..63792388-chr11:63795065..63797740,2	K562	blood:
8	chr11:63794408..63798675-chr11:63803501..63805972,4	MCF-7	breast:
9	chr11:63805907..63808645-chr11:63818618..63820814,2	MCF-7	breast:
10	chr11:63807919..63809240-chr11:63915893..63916601,3	MCF-7	breast:
11	chr11:63807602..63810051-chr11:63813403..63816265,2	MCF-7	breast:
12	chr11:63807373..63809952-chr11:63812264..63814247,2	K562	blood:
13	chr11:63820080..63822611-chr11:63830235..63832335,2	MCF-7	breast:
14	chr11:63822758..63825197-chr11:63845404..63847227,2	MCF-7	breast:
15	chr11:63819465..63824125-chr11:63824858..63829316,7	K562	blood:
16	chr11:63682847..63685544-chr11:63752668..63755278,2	MCF-7	breast:
17	chr11:63779511..63782082-chr11:63782274..63785764,3	MCF-7	breast:
18	chr11:63770454..63773392-chr11:63780828..63782649,3	K562	blood:
19	chr11:63820763..63823351-chr11:63828282..63829847,2	MCF-7	breast:
20	chr11:63760836..63762379-chr11:63771626..63773976,2	K562	blood:
21	chr11:63815764..63818216-chr11:63818640..63821960,4	K562	blood:
22	chr11:63808999..63812424-chr11:63814296..63816296,3	K562	blood:
23	chr11:63773041..63776570-chr11:63852588..63855753,3	K562	blood:
24	chr11:63787684..63790315-chr11:63796619..63799437,3	MCF-7	breast:
25	chr11:63765613..63767970-chr11:63932144..63934171,3	MCF-7	breast:
26	chr11:63826195..63827757-chr11:63859090..63861275,2	K562	blood:
27	chr11:63754724..63756802-chr11:63908470..63911045,2	MCF-7	breast:
28	chr11:63805907..63808645-chr11:63818618..63820814,2	MCF-7	breast:
29	chr11:63804025..63806335-chr11:63810879..63812713,2	K562	blood:
30	chr11:63740468..63742451-chr11:63765485..63768295,3	K562	blood:
31	chr11:63762419..63763931-chr11:63767012..63769520,2	MCF-7	breast:
32	chr11:63803039..63805403-chr11:63810325..63812518,2	K562	blood:
33	chr11:63819465..63824163-chr11:63825402..63829645,6	K562	blood:
34	chr11:63741871..63744034-chr11:63764319..63766020,2	MCF-7	breast:
35	chr11:63803810..63805326-chr11:63952443..63954679,2	MCF-7	breast:
36	chr11:63839378..63841759-chr11:63854044..63857012,2	MCF-7	breast:
37	chr11:63785744..63788442-chr11:63789350..63791751,2	MCF-7	breast:
38	chr11:63739151..63744415-chr11:63752010..63756596,9	MCF-7	breast:
39	chr11:63788630..63790804-chr11:63809082..63811420,2	K562	blood:
40	chr11:63682745..63685550-chr11:63815737..63818436,2	MCF-7	breast:
41	chr11:63822085..63823852-chr11:63832946..63834893,2	K562	blood:
42	chr11:63766704..63768642-chr11:63953085..63955113,2	MCF-7	breast:
43	chr11:63788630..63790804-chr11:63809082..63811420,2	K562	blood:
44	chr11:63771593..63774373-chr11:63777234..63778755,2	MCF-7	breast:
45	chr11:63684119..63685906-chr11:63753939..63756013,2	MCF-7	breast:
46	chr11:63799672..63801233-chr11:63804460..63806461,2	MCF-7	breast:
47	chr11:63829839..63831369-chr11:63836411..63838156,2	K562	blood:
48	chr11:63822085..63823852-chr11:63832946..63834893,2	K562	blood:
49	chr11:63779470..63782792-chr11:63782839..63786863,3	K562	blood:
50	chr11:63781876..63786325-chr11:63787038..63791246,5	K562	blood:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FLRT1-2	chr11:63804224-63804247	NONHSAT021933
2	lnc-FLRT1-1	chr11:63849162-63849513	ENSG00000256481.1
3	lnc-COX8A-2	chr11:63768587-63768992	NONHSAT021929
4	lnc-TRPT1-4	chr11:63849098-63849379	NONHSAT021936
5	lnc-COX8A-2	chr11:63769188-63769239	NONHSAT021929
6	lnc-FLRT1-2	chr11:63827896-63828128	ENSG00000256824.1
7	lnc-FLRT1-2	chr11:63849164-63849593	NONHSAT021933

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	OTUB1	hsa-miR-28-5p	chr11:63765840-63765846

Variant related genes	Relation type
ENSG00000256824	TF binding region
OTUB1	TF binding region
MACROD1	TF binding region
ENSG00000256481	TF binding region
ENSG00000256824	CpG island
OTUB1	CpG island
MACROD1	CpG island
ENSG00000256481	CpG island
ENSG00000062716	chromatin interactions
ENSG00000181908	chromatin interactions
ENSG00000184260	chromatin interactions
ENSG00000178096	chromatin interactions
ENSG00000110583	chromatin interactions
ENSG00000184678	chromatin interactions
ENSG00000184270	chromatin interactions
ENSG00000168005	chromatin interactions
ENSG00000173486	chromatin interactions
ENSG00000173153	chromatin interactions
ENSG00000121274	chromatin interactions
ENSG00000167771	chromatin interactions
ENSG00000167770	chromatin interactions
ENSG00000256100	chromatin interactions
ENSG00000256824	chromatin interactions
ENSG00000176340	chromatin interactions
ENSG00000133315	chromatin interactions
ENSG00000256481	chromatin interactions
ENSG00000168439	chromatin interactions

Extended variants
information (count: 3681 )
Associated
traits (count: 106 )

Variant overlapped rSNPs/rCNVs (count:3681 , 50 per page) page: 1 2 3 4 5 6 7 ... 74

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs483340	chr11:63754986-63754987	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs536691612	chr11:63754992-63754993	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
3	rs145198415	chr11:63754996-63754997	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
4	rs556380910	chr11:63755029-63755030	Active TSS Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
5	rs570087132	chr11:63755030-63755031	Active TSS Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
6	rs539147802	chr11:63755042-63755043	Active TSS Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
7	rs142119296	chr11:63755098-63755099	Active TSS Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
8	rs572704055	chr11:63755119-63755120	Active TSS Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
9	rs541727462	chr11:63755141-63755142	Active TSS Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
10	rs320113	chr11:63755215-63755216	Flanking Active TSS Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	12 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs374141094	chr11:63755279-63755280	Flanking Active TSS Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
12	rs79566862	chr11:63755295-63755296	Flanking Active TSS Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
13	rs563586223	chr11:63755298-63755299	Flanking Active TSS Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
14	rs11231669	chr11:63755304-63755305	Flanking Active TSS Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
15	rs532197868	chr11:63755370-63755371	Flanking Active TSS Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
16	rs371426427	chr11:63755391-63755392	Flanking Active TSS Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
17	rs545515114	chr11:63755466-63755467	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
18	rs78786669	chr11:63755498-63755499	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
19	rs80159640	chr11:63755499-63755500	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
20	rs78002450	chr11:63755500-63755501	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
21	rs528751504	chr11:63755525-63755526	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
22	rs34397221	chr11:63755533-63755534	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
23	rs559100789	chr11:63755548-63755549	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
24	rs545685778	chr11:63755567-63755568	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
25	rs190062130	chr11:63755568-63755569	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
26	rs34241806	chr11:63755584-63755585	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
27	rs531080813	chr11:63755592-63755593	Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
28	rs530719069	chr11:63755602-63755603	Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
29	rs550109550	chr11:63755607-63755608	Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
30	rs545722854	chr11:63755619-63755620	Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
31	rs569968016	chr11:63755647-63755648	Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
32	rs539109794	chr11:63755650-63755651	Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
33	rs531183204	chr11:63755660-63755661	Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
34	rs375390363	chr11:63755687-63755688	Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
35	rs562663805	chr11:63755733-63755734	Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
36	rs374524419	chr11:63755742-63755743	Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
37	rs144215400	chr11:63755825-63755826	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
38	rs146537845	chr11:63755827-63755828	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
39	rs559126240	chr11:63755939-63755940	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
40	rs566264770	chr11:63755950-63755951	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
41	rs744864	chr11:63755961-63755962	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers	Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs554865823	chr11:63755982-63755983	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
43	rs575035360	chr11:63755999-63756000	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription Enhancers	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
44	rs543774091	chr11:63756029-63756030	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
45	rs181133600	chr11:63756030-63756031	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs112636655	chr11:63756042-63756043	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs374859386	chr11:63756059-63756060	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
48	rs549302473	chr11:63756083-63756084	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
49	rs373268158	chr11:63756094-63756095	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
50	rs576458828	chr11:63756098-63756099	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:106)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Pituitary adenoma	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	21785460	CNVD
Breast cancer	16417655	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	17217626	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Prostate cancer	18779856	CNVD
Cancer	17160897	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Autism	21865298	CNVD

Chromatin state (count:3757 , 50 per page) page: 1 2 3 4 5 6 7 ... 76

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63753000-63755000	Active TSS	Fetal Kidney	kidney
2	chr11:63753000-63755200	Flanking Active TSS	Primary B cells from cord blood	blood
3	chr11:63753000-63755400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
4	chr11:63753200-63755000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr11:63753200-63755200	Active TSS	ES-I3 Cell Line	embryonic stem cell
6	chr11:63753600-63755000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr11:63753800-63755200	Active TSS	HUES64 Cell Line	embryonic stem cell
8	chr11:63754200-63755000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
9	chr11:63754200-63755000	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
10	chr11:63754200-63755000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr11:63754200-63755000	Flanking Active TSS	Thymus	Thymus
12	chr11:63754200-63755200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr11:63754200-63755200	Flanking Active TSS	Adipose Nuclei	Adipose
14	chr11:63754200-63755200	Flanking Active TSS	Colonic Mucosa	Colon
15	chr11:63754200-63755400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr11:63754200-63755400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
17	chr11:63754400-63755000	Transcr. at gene 5' and 3'	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr11:63754400-63755000	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
19	chr11:63754400-63755000	Flanking Active TSS	Primary T cells from cord blood	blood
20	chr11:63754400-63755000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
21	chr11:63754400-63755000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
22	chr11:63754400-63755000	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
23	chr11:63754400-63755000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
24	chr11:63754400-63755000	Flanking Active TSS	Brain Cingulate Gyrus	brain
25	chr11:63754400-63755000	Flanking Active TSS	Brain Germinal Matrix	brain
26	chr11:63754400-63755000	Flanking Active TSS	Duodenum Mucosa	Duodenum
27	chr11:63754400-63755000	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
28	chr11:63754400-63755000	Flanking Active TSS	Esophagus	oesophagus
29	chr11:63754400-63755000	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
30	chr11:63754400-63755000	Flanking Active TSS	Fetal Muscle Trunk	muscle
31	chr11:63754400-63755000	Flanking Active TSS	Fetal Muscle Leg	muscle
32	chr11:63754400-63755000	Flanking Active TSS	Fetal Stomach	stomach
33	chr11:63754400-63755000	Flanking Active TSS	Fetal Thymus	thymus
34	chr11:63754400-63755000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
35	chr11:63754400-63755000	Flanking Active TSS	HUVEC	blood vessel
36	chr11:63754400-63755200	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
37	chr11:63754400-63755200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr11:63754400-63755200	Flanking Active TSS	Liver	Liver
39	chr11:63754400-63755200	Flanking Active TSS	Fetal Brain Male	brain
40	chr11:63754400-63755200	Flanking Active TSS	Fetal Brain Female	brain
41	chr11:63754400-63755200	Flanking Active TSS	Fetal Intestine Small	intestine
42	chr11:63754400-63755200	Flanking Active TSS	Rectal Smooth Muscle	rectum
43	chr11:63754400-63755200	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
44	chr11:63754400-63755200	Flanking Active TSS	Dnd41	blood
45	chr11:63754400-63755200	Flanking Active TSS	NHLF	lung
46	chr11:63754400-63755200	Flanking Active TSS	Osteobl	bone
47	chr11:63754400-63755400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr11:63754400-63755400	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr11:63754400-63755400	Flanking Active TSS	Brain Hippocampus Middle	brain
50	chr11:63754400-63755400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum

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