Variant report

Variant	nsv984049
Chromosome Location	chr15:34657736-34700792
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1100)
CpG islands
(count:612)
Chromatin interactive
region (count:38)
LncRNA
region (count:2)
Mature miRNA
region (count: 2)
miRNA target
sites (count:0)

(count:1100 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:34659662-34660316	K562	blood:	n/a	n/a
2	ARID3A	chr15:34659927-34660209	HepG2	liver:	n/a	n/a
3	ATF2	chr15:34659423-34660283	GM12878	blood:	n/a	n/a
4	ATF2	chr15:34662115-34662776	GM12878	blood:	n/a	n/a
5	ATF2	chr15:34662101-34662703	GM12878	blood:	n/a	n/a
6	BACH1	chr15:34659688-34659949	K562	blood:	n/a	n/a
7	BACH1	chr15:34659514-34660110	H1-hESC	embryonic stem cell:	n/a	n/a
8	BATF	chr15:34662171-34662762	GM12878	blood:	n/a	chr15:34662522-34662532
9	BATF	chr15:34696017-34696728	GM12878	blood:	n/a	n/a
10	BATF	chr15:34662207-34662693	GM12878	blood:	n/a	chr15:34662522-34662532
11	BATF	chr15:34696116-34696523	GM12878	blood:	n/a	n/a
12	BATF	chr15:34695261-34695641	GM12878	blood:	n/a	n/a
13	BATF	chr15:34695287-34695628	GM12878	blood:	n/a	n/a
14	BCL11A	chr15:34696015-34696513	GM12878	blood:	n/a	n/a
15	BCL11A	chr15:34695333-34695638	GM12878	blood:	n/a	n/a
16	BCL3	chr15:34659429-34660041	GM12878	blood:	n/a	chr15:34659481-34659494
17	BCL3	chr15:34659432-34660351	A549	lung:	n/a	chr15:34659481-34659494
18	BCL3	chr15:34658349-34658775	A549	lung:	n/a	chr15:34658634-34658643 chr15:34658576-34658585
19	BCLAF1	chr15:34659342-34660312	GM12878	blood:	n/a	chr15:34659481-34659494
20	BCLAF1	chr15:34659455-34660246	GM12878	blood:	n/a	chr15:34659481-34659494
21	BHLHE40	chr15:34659492-34660184	K562	blood:	n/a	n/a
22	BHLHE40	chr15:34659383-34660118	GM12878	blood:	n/a	n/a
23	BHLHE40	chr15:34658419-34659108	K562	blood:	n/a	chr15:34658672-34658688 chr15:34658923-34658939
24	BHLHE40	chr15:34658543-34658731	GM12878	blood:	n/a	chr15:34658672-34658688
25	BHLHE40	chr15:34659005-34659066	GM12878	blood:	n/a	n/a
26	BHLHE40	chr15:34662576-34662605	GM12878	blood:	n/a	n/a
27	BHLHE40	chr15:34657488-34657770	GM12878	blood:	n/a	n/a
28	BRCA1	chr15:34659977-34660036	HepG2	liver:	n/a	n/a
29	BRCA1	chr15:34659892-34660291	GM12878	blood:	n/a	n/a
30	BRCA1	chr15:34659603-34659756	HepG2	liver:	n/a	n/a
31	BRCA1	chr15:34659567-34660241	Hela-S3	cervix:	n/a	n/a
32	CBX3	chr15:34659657-34660230	K562	blood:	n/a	n/a
33	CCNT2	chr15:34658972-34660051	K562	blood:	n/a	chr15:34659485-34659494
34	CEBPB	chr15:34659746-34659863	K562	blood:	n/a	n/a
35	CEBPB	chr15:34659645-34660017	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr15:34659437-34660523	GM12878	blood:	n/a	n/a
37	CEBPB	chr15:34672751-34672946	HepG2	liver:	n/a	n/a
38	CEBPB	chr15:34658940-34659153	K562	blood:	n/a	n/a
39	CEBPB	chr15:34658875-34659199	IMR90	lung:	n/a	n/a
40	CEBPB	chr15:34664839-34665024	A549	lung:	n/a	n/a
41	CEBPB	chr15:34658431-34658752	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr15:34659476-34660194	Hela-S3	cervix:	n/a	n/a
43	CEBPB	chr15:34662138-34662894	GM12878	blood:	n/a	n/a
44	CEBPB	chr15:34658998-34659105	H1-hESC	embryonic stem cell:	n/a	n/a
45	CEBPB	chr15:34672204-34672242	HepG2	liver:	n/a	chr15:34672210-34672221
46	CEBPD	chr15:34659193-34659792	HepG2	liver:	n/a	n/a
47	CHD1	chr15:34659519-34660784	GM12878	blood:	n/a	n/a
48	CHD1	chr15:34659543-34660050	H1-hESC	embryonic stem cell:	n/a	n/a
49	CHD1	chr15:34659009-34659117	GM12878	blood:	n/a	n/a
50	CHD1	chr15:34658473-34658481	GM12878	blood:	n/a	n/a

(count:612 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:34658812-34658862	SAEC	small airway:	n/a
2	chr15:34671426-34671476	NT2-D1	testis:	n/a
3	chr15:34658812-34658862	SAEC	small airway:	n/a
4	chr15:34671426-34671476	NT2-D1	testis:	n/a
5	chr15:34700272-34700322	MCF10A-Er-Src	breast:	n/a
6	chr15:34700272-34700322	T-47D	breast:	n/a
7	chr15:34700272-34700322	ECC-1	luminal epithelium:	n/a
8	chr15:34659687-34659737	CMK	blood:	n/a
9	chr15:34700272-34700322	HMEC	breast:	n/a
10	chr15:34659687-34659737	MCF10A-Er-Src	breast:	n/a
11	chr15:34700272-34700322	HRE	kidney:	n/a
12	chr15:34660076-34660126	ProgFib	skin:	n/a
13	chr15:34658812-34658862	NH-A	brain:	n/a
14	chr15:34659815-34659865	Hepatocyte	liver:	n/a
15	chr15:34660076-34660126	ovcar-3	ovarian:	n/a
16	chr15:34659585-34659635	MCF-7	breast:	n/a
17	chr15:34659304-34659354	HRPEpiC	eye:	n/a
18	chr15:34662635-34662685	K562	blood:	n/a
19	chr15:34659687-34659737	HPAEpiC	pulmonary alveolar:	n/a
20	chr15:34658812-34658862	SKMC	muscle:	n/a
21	chr15:34659304-34659354	SK-N-SH	brain:	n/a
22	chr15:34662635-34662685	HCPEpiC	choroid plexus:	n/a
23	chr15:34659969-34660019	HRE	kidney:	n/a
24	chr15:34659304-34659354	HRE	kidney:	n/a
25	chr15:34658812-34658862	GM06990	blood:	n/a
26	chr15:34659687-34659737	U87	brain:	n/a
27	chr15:34659687-34659737	SK-N-SH_RA	brain:	n/a
28	chr15:34659304-34659354	Caco-2	colon:	n/a
29	chr15:34659585-34659635	HIPEpiC	eye:	n/a
30	chr15:34671426-34671476	HRCEpiC	kidney:	n/a
31	chr15:34659969-34660019	PrEC	prostate:	n/a
32	chr15:34659585-34659635	HCPEpiC	choroid plexus:	n/a
33	chr15:34659815-34659865	HCF	heart:	n/a
34	chr15:34700272-34700322	HCF	heart:	n/a
35	chr15:34671426-34671476	U87	brain:	n/a
36	chr15:34671426-34671476	HAEpiC	amniotic membrane:	n/a
37	chr15:34700272-34700322	SK-N-SH_RA	brain:	n/a
38	chr15:34660076-34660126	HEEpiC	esophagus:	n/a
39	chr15:34659815-34659865	SK-N-SH	brain:	n/a
40	chr15:34671426-34671476	ECC-1	luminal epithelium:	n/a
41	chr15:34659585-34659635	SK-N-MC	brain:	n/a
42	chr15:34659969-34660019	HMEC	breast:	n/a
43	chr15:34659687-34659737	ovcar-3	ovarian:	n/a
44	chr15:34659815-34659865	BJ	skin:	n/a
45	chr15:34659304-34659354	Hela-S3	cervix:	n/a
46	chr15:34662635-34662685	LNCaP	prostate:	n/a
47	chr15:34671426-34671476	T-47D	breast:	n/a
48	chr15:34660076-34660126	SAEC	small airway:	n/a
49	chr15:34659687-34659737	Hepatocyte	liver:	n/a
50	chr15:34662635-34662685	AG04449	skin:	fetal

(count:38 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:34659441..34662117-chr15:34875107..34877933,3	K562	blood:
2	chr15:34658931..34659843-chr17:42401742..42402293,2	HCT-116	colon:
3	chr15:34519148..34521644-chr15:34659451..34661317,2	K562	blood:
4	chr15:34659640..34660247-chr17:7386338..7387271,2	NB4	blood:
5	chr15:34393027..34397233-chr15:34658612..34660877,5	K562	blood:
6	chr1:20812111..20812967-chr15:34659407..34660267,2	HCT-116	colon:
7	chr15:34655711..34662054-chr15:34662110..34667087,9	K562	blood:
8	chr15:34654804..34656714-chr15:34658910..34661703,3	K562	blood:
9	chr15:34658959..34659493-chr17:56756873..56757469,2	Hela-S3	cervix:
10	chr14:67878348..67879211-chr15:34659300..34659943,2	Hela-S3	cervix:
11	chr15:34634571..34635945-chr15:34658808..34660439,12	MCF-7	breast:
12	chr15:34500871..34503422-chr15:34659158..34662481,4	K562	blood:
13	chr15:34393027..34394938-chr15:34659377..34661190,2	K562	blood:
14	chr15:34634909..34635862-chr15:34659481..34660032,2	MCF-7	breast:
15	chr15:34655711..34662054-chr15:34662110..34667087,9	K562	blood:
16	chr15:34659251..34659865-chr9:131940113..131940706,2	Hela-S3	cervix:
17	chr15:34635038..34635903-chr15:34659506..34660374,4	MCF-7	breast:
18	chr15:34659866..34661509-chr15:34661998..34663782,2	K562	blood:
19	chr15:34659352..34660347-chr5:41870135..41870861,2	Hela-S3	cervix:
20	chr15:34659129..34659929-chr17:79478869..79479844,2	HCT-116	colon:
21	chr15:34662221..34663969-chr15:34664230..34666356,2	MCF-7	breast:
22	chr15:34659866..34661509-chr15:34661998..34663782,2	K562	blood:
23	chr15:34500776..34502841-chr15:34668848..34671428,2	K562	blood:
24	chr11:62420159..62420929-chr15:34659289..34659854,2	Hela-S3	cervix:
25	chr15:34633629..34635584-chr15:34657779..34659599,2	MCF-7	breast:
26	chr15:34658082..34661057-chr15:34874863..34877414,3	MCF-7	breast:
27	chr15:34629384..34632183-chr15:34656418..34659243,3	MCF-7	breast:
28	chr15:34500928..34503711-chr15:34659510..34661352,2	MCF-7	breast:
29	chr15:34515761..34518007-chr15:34659442..34662221,3	K562	blood:
30	chr15:34633689..34636672-chr15:34659379..34661265,2	MCF-7	breast:
31	chr11:62608503..62609297-chr15:34658796..34659673,3	Hela-S3	cervix:
32	chr15:34659566..34660339-chr15:34879136..34879733,2	MCF-7	breast:
33	chr15:34515223..34518649-chr15:34658701..34662221,4	K562	blood:
34	chr15:34330374..34330923-chr15:34659512..34660213,2	K562	blood:
35	chr15:34632008..34636763-chr15:34655757..34660926,8	K562	blood:
36	chr15:34635005..34635906-chr15:34659046..34660693,6	K562	blood:
37	chr15:34635280..34637526-chr15:34658001..34660457,2	K562	blood:
38	chr15:34654880..34657124-chr15:34662673..34664645,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LPCAT4-1	chr15:34699777-34699936	NONHSAT041586
2	lnc-LPCAT4-1	chr15:34698878-34699071	NONHSAT041586

miRNA name	Chromosome Location	mirBase accession
hsa-miR-1233-5p	chr15:34674327-34674348	MIMAT0022943
hsa-miR-1233-3p	chr15:34674270-34674289	MIMAT0005588

No data

Variant related genes	Relation type
MIR1233-1	TF binding region
LPCAT4	TF binding region
ENSG00000261081	TF binding region
ENSG00000260639	TF binding region
ENSG00000259904	TF binding region
GOLGA8A	TF binding region
ENSG00000266205	TF binding region
MIR1233-1	CpG island
LPCAT4	CpG island
ENSG00000261081	CpG island
ENSG00000260639	CpG island
ENSG00000259904	CpG island
GOLGA8A	CpG island
ENSG00000266205	CpG island
ENSG00000215252	chromatin interactions
ENSG00000100558	chromatin interactions
ENSG00000182117	chromatin interactions
ENSG00000185085	chromatin interactions
ENSG00000176454	chromatin interactions
ENSG00000248668	chromatin interactions
ENSG00000134152	chromatin interactions
ENSG00000128463	chromatin interactions
ENSG00000266205	chromatin interactions
ENSG00000188483	chromatin interactions
ENSG00000162545	chromatin interactions
ENSG00000140199	chromatin interactions
ENSG00000259904	chromatin interactions
ENSG00000184507	chromatin interactions
ENSG00000184009	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000083720	chromatin interactions
ENSG00000134153	chromatin interactions
ENSG00000200997	chromatin interactions
ENSG00000013306	chromatin interactions
ENSG00000182405	chromatin interactions

Extended variants
information (count: 1068 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:1068 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs368939594	chr15:34657757-34657758	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
2	rs202015138	chr15:34657789-34657790	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs370390141	chr15:34657857-34657858	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
4	rs200440948	chr15:34657870-34657871	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs374131436	chr15:34657873-34657874	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
6	rs190932196	chr15:34657920-34657921	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
7	rs575280111	chr15:34657931-34657932	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs370054775	chr15:34657942-34657943	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs183439958	chr15:34657994-34657995	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
10	rs561372135	chr15:34658006-34658007	Flanking Active TSS Enhancers Genic enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs375156776	chr15:34658074-34658075	Flanking Active TSS Enhancers Genic enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs147654714	chr15:34658084-34658085	Flanking Active TSS Enhancers Genic enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
13	rs188732583	chr15:34658097-34658098	Flanking Active TSS Enhancers Genic enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
14	rs532517886	chr15:34658142-34658143	Flanking Active TSS Enhancers Genic enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
15	rs78164443	chr15:34658176-34658177	Flanking Active TSS Enhancers Genic enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
16	rs193188205	chr15:34658203-34658204	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
17	rs562981644	chr15:34658218-34658219	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
18	rs530162650	chr15:34658235-34658236	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
19	rs183336334	chr15:34658292-34658293	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
20	rs78911085	chr15:34658293-34658294	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs3751578	chr15:34658365-34658366	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs57146782	chr15:34658382-34658383	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs1390425	chr15:34658419-34658420	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
24	rs538232767	chr15:34658473-34658474	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
25	rs556712310	chr15:34658524-34658525	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
26	rs575296608	chr15:34658616-34658617	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
27	rs112686731	chr15:34658671-34658672	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
28	rs536006095	chr15:34658692-34658693	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
29	rs554662636	chr15:34658706-34658707	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
30	rs573430083	chr15:34658802-34658803	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
31	rs540848903	chr15:34658860-34658861	Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
32	rs77655089	chr15:34658868-34658869	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
33	rs577644169	chr15:34658894-34658895	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
34	rs544572414	chr15:34658921-34658922	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
35	rs562787708	chr15:34658923-34658924	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
36	rs530201349	chr15:34658941-34658942	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
37	rs548352815	chr15:34658970-34658971	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
38	rs56212420	chr15:34658985-34658986	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
39	rs113181120	chr15:34659001-34659002	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
40	rs528237443	chr15:34659053-34659054	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
41	rs546425070	chr15:34659059-34659060	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
42	rs571187900	chr15:34659096-34659097	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
43	rs538597344	chr15:34659103-34659104	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
44	rs201588215	chr15:34659183-34659184	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
45	rs568721606	chr15:34659227-34659228	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
46	rs200318241	chr15:34659237-34659238	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
47	rs199696158	chr15:34659252-34659253	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
48	rs201839751	chr15:34659254-34659255	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
49	rs2270611	chr15:34659257-34659258	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
50	rs559220967	chr15:34659362-34659363	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Abnormal corpus callosum	21572526	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Legius syndrome	19443465	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Prader-willi syndrome	21504564	CNVD
Cancer	17440070	CNVD
Basal cell lymphoma	17053054	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Acute lymphoblastic leukemia	18458336	CNVD

Chromatin state (count:700 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34645400-34657800	Strong transcription	Fetal Stomach	stomach
2	chr15:34646600-34658000	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr15:34647200-34658000	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr15:34649000-34657800	Weak transcription	Brain Substantia Nigra	brain
5	chr15:34649000-34657800	Weak transcription	NHDF-Ad	bronchial
6	chr15:34650400-34658400	Weak transcription	Psoas Muscle	Psoas
7	chr15:34650600-34657800	Weak transcription	Liver	Liver
8	chr15:34651000-34658200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr15:34651800-34658200	Weak transcription	Small Intestine	intestine
10	chr15:34652000-34657800	Weak transcription	Fetal Lung	lung
11	chr15:34652600-34657800	Weak transcription	Primary B cells from cord blood	blood
12	chr15:34653200-34657800	Weak transcription	Placenta	Placenta
13	chr15:34653600-34657800	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr15:34655000-34657800	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr15:34655000-34657800	Genic enhancers	A549	lung
16	chr15:34655000-34658000	Weak transcription	Fetal Kidney	kidney
17	chr15:34655000-34658400	Weak transcription	Aorta	Aorta
18	chr15:34655400-34657800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr15:34655400-34657800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr15:34655400-34657800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr15:34655400-34657800	Weak transcription	HSMMtube	muscle
22	chr15:34656000-34657800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr15:34656000-34657800	Weak transcription	NHLF	lung
24	chr15:34656000-34658000	Enhancers	Fetal Heart	heart
25	chr15:34656200-34657800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr15:34656200-34658000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr15:34656400-34657800	Weak transcription	Primary hematopoietic stem cells	blood
28	chr15:34656400-34657800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr15:34656400-34657800	Weak transcription	Adipose Nuclei	Adipose
30	chr15:34656600-34657800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr15:34656600-34657800	Weak transcription	HUES48 Cell Line	embryonic stem cell
32	chr15:34656600-34657800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
33	chr15:34656600-34658000	Weak transcription	Primary T cells from cord blood	blood
34	chr15:34656600-34658000	Weak transcription	Cortex derived primary cultured neurospheres	brain
35	chr15:34656600-34658400	Weak transcription	Ovary	ovary
36	chr15:34656600-34658400	Enhancers	Spleen	Spleen
37	chr15:34657000-34657800	Enhancers	Primary T helper cells PMA-I stimulated	--
38	chr15:34657000-34657800	Enhancers	Left Ventricle	heart
39	chr15:34657000-34658000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
40	chr15:34657000-34658000	Enhancers	Primary T killer memory cells from peripheral blood	blood
41	chr15:34657000-34658200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
42	chr15:34657000-34658800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
43	chr15:34657200-34657800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr15:34657200-34657800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr15:34657200-34657800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr15:34657200-34657800	Enhancers	Brain Inferior Temporal Lobe	brain
47	chr15:34657200-34657800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
48	chr15:34657200-34657800	Enhancers	Colonic Mucosa	Colon
49	chr15:34657200-34657800	Genic enhancers	Fetal Intestine Small	intestine
50	chr15:34657200-34657800	Enhancers	Skeletal Muscle Female	skeletal muscle

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