Variant report

Variant rs562981644
Chromosome Location chr15:34658218-34658219
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34650400-34658400 Weak transcription Psoas Muscle Psoas
2 chr15:34655000-34658400 Weak transcription Aorta Aorta
3 chr15:34656600-34658400 Weak transcription Ovary ovary
4 chr15:34656600-34658400 Enhancers Spleen Spleen
5 chr15:34657000-34658800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
6 chr15:34657200-34658400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
7 chr15:34657200-34658400 Enhancers Lung lung
8 chr15:34657200-34658400 Enhancers Pancreas Pancrea
9 chr15:34657200-34658800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
10 chr15:34657200-34659000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
11 chr15:34657400-34658400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr15:34657400-34658600 Flanking Active TSS Primary T cells fromperipheralblood blood
13 chr15:34657400-34658600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
14 chr15:34657400-34658600 Flanking Active TSS Duodenum Mucosa Duodenum
15 chr15:34657400-34658800 Flanking Active TSS Brain Germinal Matrix brain
16 chr15:34657600-34658400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr15:34657600-34658400 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
18 chr15:34657600-34658400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr15:34657600-34658400 Enhancers Primary monocytes fromperipheralblood blood
20 chr15:34657600-34658400 Enhancers Primary B cells from peripheral blood blood
21 chr15:34657600-34658400 Enhancers Primary T killer naive cells fromperipheralblood blood
22 chr15:34657600-34658400 Enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr15:34657600-34658400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
24 chr15:34657600-34658400 Flanking Active TSS Stomach Mucosa stomach
25 chr15:34657600-34658600 Flanking Active TSS Muscle Satellite Cultured Cells --
26 chr15:34657600-34658800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
27 chr15:34657600-34659400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
28 chr15:34657600-34660600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr15:34657800-34658400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
30 chr15:34657800-34658400 Flanking Active TSS HUES64 Cell Line embryonic stem cell
31 chr15:34657800-34658400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
32 chr15:34657800-34658400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
33 chr15:34657800-34658400 Flanking Active TSS Brain Hippocampus Middle brain
34 chr15:34657800-34658400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
35 chr15:34657800-34658400 Flanking Active TSS Fetal Intestine Small intestine
36 chr15:34657800-34658400 Enhancers Placenta Placenta
37 chr15:34657800-34658400 Flanking Active TSS A549 lung
38 chr15:34657800-34658400 Flanking Active TSS HepG2 liver
39 chr15:34657800-34658400 Flanking Active TSS NHLF lung
40 chr15:34657800-34658600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
41 chr15:34657800-34658600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
42 chr15:34657800-34658600 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
43 chr15:34657800-34658600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
44 chr15:34657800-34658600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr15:34657800-34658600 Enhancers Liver Liver
46 chr15:34657800-34658600 Flanking Active TSS Brain Cingulate Gyrus brain
47 chr15:34657800-34658600 Flanking Active TSS Brain Inferior Temporal Lobe brain
48 chr15:34657800-34658600 Flanking Active TSS Colon Smooth Muscle Colon
49 chr15:34657800-34658600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
50 chr15:34657800-34658600 Flanking Active TSS Esophagus oesophagus

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