Variant report

Variant rs200440948
Chromosome Location chr15:34657870-34657871
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34646600-34658000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr15:34647200-34658000 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr15:34650400-34658400 Weak transcription Psoas Muscle Psoas
4 chr15:34651000-34658200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr15:34651800-34658200 Weak transcription Small Intestine intestine
6 chr15:34655000-34658000 Weak transcription Fetal Kidney kidney
7 chr15:34655000-34658400 Weak transcription Aorta Aorta
8 chr15:34656000-34658000 Enhancers Fetal Heart heart
9 chr15:34656200-34658000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr15:34656600-34658000 Weak transcription Primary T cells from cord blood blood
11 chr15:34656600-34658000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr15:34656600-34658400 Weak transcription Ovary ovary
13 chr15:34656600-34658400 Enhancers Spleen Spleen
14 chr15:34657000-34658000 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr15:34657000-34658000 Enhancers Primary T killer memory cells from peripheral blood blood
16 chr15:34657000-34658200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
17 chr15:34657000-34658800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
18 chr15:34657200-34658000 Enhancers H1 Cell Line embryonic stem cell
19 chr15:34657200-34658200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr15:34657200-34658200 Enhancers Right Atrium heart
21 chr15:34657200-34658400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
22 chr15:34657200-34658400 Enhancers Lung lung
23 chr15:34657200-34658400 Enhancers Pancreas Pancrea
24 chr15:34657200-34658800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
25 chr15:34657200-34659000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
26 chr15:34657400-34658000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr15:34657400-34658000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr15:34657400-34658200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
29 chr15:34657400-34658200 Enhancers Primary T helper naive cells from peripheral blood blood
30 chr15:34657400-34658200 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr15:34657400-34658200 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr15:34657400-34658200 Enhancers Sigmoid Colon Sigmoid Colon
33 chr15:34657400-34658200 Flanking Active TSS GM12878-XiMat blood
34 chr15:34657400-34658400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr15:34657400-34658600 Flanking Active TSS Primary T cells fromperipheralblood blood
36 chr15:34657400-34658600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
37 chr15:34657400-34658600 Flanking Active TSS Duodenum Mucosa Duodenum
38 chr15:34657400-34658800 Flanking Active TSS Brain Germinal Matrix brain
39 chr15:34657600-34658000 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr15:34657600-34658000 Enhancers Fetal Brain Male brain
41 chr15:34657600-34658000 Enhancers Fetal Intestine Large intestine
42 chr15:34657600-34658000 Enhancers Thymus Thymus
43 chr15:34657600-34658000 Genic enhancers NHEK skin
44 chr15:34657600-34658200 Enhancers H9 Cell Line embryonic stem cell
45 chr15:34657600-34658200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr15:34657600-34658200 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr15:34657600-34658200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
48 chr15:34657600-34658200 Flanking Active TSS Brain Anterior Caudate brain
49 chr15:34657600-34658200 Enhancers Fetal Thymus thymus
50 chr15:34657600-34658200 Enhancers K562 blood

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