Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11099638	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11736000	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11945980	0.93[ASN][1000 genomes]
rs12506772	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1495143	0.94[ASN][1000 genomes]
rs1495147	0.94[ASN][1000 genomes]
rs1532357	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1532358	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17363778	0.93[ASN][1000 genomes]
rs2201487	0.93[ASN][1000 genomes]
rs2201488	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2220887	0.82[ASN][1000 genomes]
rs28462176	0.93[ASN][1000 genomes]
rs28857537	0.99[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs348702	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs348704	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs5023577	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7657139	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7686616	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs903521	0.97[ASN][1000 genomes]
rs903522	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524354	chr4:85006975-85215142	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv829996	chr4:85016673-85173300	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv879514	chr4:85057124-85272572	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv1012379	chr4:85071268-85205732	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:85157600-85171000	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr4:85160800-85165400	Weak transcription	K562	blood
3	chr4:85161000-85165600	Weak transcription	Placenta	Placenta

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