The 2.0 version of rSNPBase

Variant report

Variant rs10003401
Chromosome Location chr4:143040577-143040578
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:142990000-143051200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr4:143001400-143040600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr4:143002600-143041800 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr4:143004600-143051600 Weak transcription Pancreas Pancrea
5 chr4:143010400-143043400 Weak transcription Psoas Muscle Psoas
6 chr4:143010400-143057000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr4:143012400-143040600 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr4:143014600-143049600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr4:143015800-143049600 Weak transcription Fetal Muscle Leg muscle
10 chr4:143017800-143044400 Weak transcription Fetal Heart heart
11 chr4:143018800-143109600 Weak transcription Fetal Muscle Trunk muscle
12 chr4:143022400-143045200 Weak transcription Stomach Smooth Muscle stomach
13 chr4:143022600-143049600 Weak transcription NHDF-Ad bronchial
14 chr4:143025400-143066800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr4:143030000-143041600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr4:143030000-143049400 Weak transcription Left Ventricle heart
17 chr4:143030000-143057000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr4:143030200-143041800 Weak transcription NHEK skin
19 chr4:143031000-143064800 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr4:143031800-143048000 Weak transcription Rectal Smooth Muscle rectum
21 chr4:143032000-143041400 Weak transcription HSMMtube muscle
22 chr4:143032000-143041600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr4:143032000-143042000 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr4:143032000-143043200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr4:143032000-143049600 Weak transcription Primary hematopoietic stem cells blood
26 chr4:143032400-143041200 Weak transcription HSMM muscle
27 chr4:143032400-143041600 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr4:143034000-143041600 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr4:143034000-143041800 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr4:143034000-143048400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr4:143034000-143061600 Weak transcription Muscle Satellite Cultured Cells --
32 chr4:143034800-143041600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr4:143035000-143041200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr4:143035200-143041400 Weak transcription HMEC breast
35 chr4:143035600-143041000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr4:143035600-143041200 Weak transcription Dnd41 blood
37 chr4:143035800-143040600 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr4:143035800-143040600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr4:143035800-143041200 Weak transcription Primary T cells fromperipheralblood blood
40 chr4:143036000-143041600 Weak transcription Primary T cells from cord blood blood
41 chr4:143036200-143041000 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr4:143036200-143041400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr4:143039200-143059000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr4:143040400-143040800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr4:143040400-143042400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr4:143040400-143046000 Strong transcription Primary T regulatory cells fromperipheralblood blood
47 chr4:143040400-143046400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr4:143040400-143047200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015